FC872689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_GLUDA (ATP synthase gamma chain OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=atpG PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.962e-23 Identity = 60/135 (44.44%), Postives = 89/135 (65.93%), Query Frame = 2 Query: 188 ILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 +L+ EFD ++Y++F++V+S PT ++ + + + G E SYE E GE ++L +L ++ +LE+A EQGARM+AMD+++RNAG+ +DRLTLTYNRTRQ +IT ELIEIISGA A+ Sbjct: 164 MLEKGEFDVCTVVYNRFNNVMSQTPTEMQLIPLAVPANDTVASG---ERASYEFEPGEE--QLLSSLLPRNLQVQLYATMLESAAGEQGARMTAMDNATRNAGKAIDRLTLTYNRTRQTNITNELIEIISGAQAV 293
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRAJA (ATP synthase gamma chain OS=Bradyrhizobium japonicum GN=atpG PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.962e-23 Identity = 75/185 (40.54%), Postives = 99/185 (53.51%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 KE K+ +G K L R K I + L + +A +L E FD + YS+F SV++ +PT ++ P +VE G SYE E E EIL L + +F A+LEN S GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+ Sbjct: 114 KEVKFFCVGRKGYEQLRRQFDKQIVEHLDLRSVRQLGFVNAEDIAKKVLARFEAGEFDVCTLFYSRFRSVIAQIPTAQQII-PLVVEE-----GTAASTTSYEYEPEED--EILTRLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAQITKELIEIISGAEAV 290
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHORU (ATP synthase gamma chain OS=Rhodospirillum rubrum GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 71/188 (37.77%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQV---SVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLS---PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K + L R+ K I I + + ++ S L D+ + EFD ++Y++F S +S + T ++ P V ++ G YE E E EIL +L + +F +LE+ SEQGARM+AMD+++RNAG+M+ +L+LTYNRTRQA IT ELIEIISGA A+ Sbjct: 114 KTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEE--EILADLLPKNVAIQVFRGMLESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKELIEIISGAEAI 299
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHORT (ATP synthase gamma chain OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 71/188 (37.77%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQV---SVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLS---PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K + L R+ K I I + + ++ S L D+ + EFD ++Y++F S +S + T ++ P V ++ G YE E E EIL +L + +F +LE+ SEQGARM+AMD+++RNAG+M+ +L+LTYNRTRQA IT ELIEIISGA A+ Sbjct: 114 KTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEE--EILADLLPKNVAIQVFRGMLESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKELIEIISGAEAI 299
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOBL (ATP synthase gamma chain OS=Rhodopseudomonas blastica GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEF---DALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K + L RD + L Y+ +A ++L E D + I Y++F SV+S +PT V+ + E + Y+ E E IL +L + +F A+LENA SEQGARMSAMD+++RNAG+M+++LT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 112 KTVKILTVGKKGREQLKRDWASAFVGHVDLSDVRRLGYSNAQGIAREVLAAFEAGEADVVTIFYNRFQSVISQVPTAQQVIPAKFEAAETNA--------LYDYEPSEEA--ILADLLPRGVATQIFTALLENAASEQGARMSAMDNATRNAGDMINKLTIQYNRSRQAAITKELIEIISGAEAL 286
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUSU (ATP synthase gamma chain OS=Brucella suis GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUSI (ATP synthase gamma chain OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUO2 (ATP synthase gamma chain OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUC2 (ATP synthase gamma chain OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.347e-23 Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPS (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisB5) GN=atpG PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.371e-23 Identity = 78/191 (40.84%), Postives = 104/191 (54.45%), Query Frame = 2 Query: 29 LNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 +N G K K+ +G K L R K I I L + +A ++ N EFD + YS+F SV+S +PT A L P +VE A + G + YE E + EIL L + +F A+LEN S GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+ Sbjct: 110 MNQG--KTVKFFCVGRKGYEQLRRTFDKQIIENIELRSVRQLGFVNAEDIAQKVIARFNNGEFDVCTLFYSRFKSVISQIPT-AQQLIPLVVE--APAAGSVATSYEYEPE----EDEILSTLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 291 The following BLAST results are available for this feature:
BLAST of FC872689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872689 ID=FC872689; Name=FC872689; organism=Citrus clementina; type=EST; length=827bpback to top |