FC872689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_STRA3 (ATP synthase gamma chain OS=Streptococcus agalactiae serotype III GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 43/139 (30.94%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 179 ADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 595 A ++ KN FD L + Y+ H V S + + E +A+ + + +E+E + IL+ L +++ A+++ +E A M+AM +++ NA +++ LT+ YNR RQA+IT E+ EI++GA+ALE Sbjct: 159 AVEMYKNELFDELYVCYN--HHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELE--PNREVILEQLLPQYTESLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE 293
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PSEFS (ATP synthase gamma chain OS=Pseudomonas fluorescens (strain SBW25) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 55/179 (30.73%), Postives = 95/179 (53.07%), Query Frame = 2 Query: 65 ILGEKAKAILVRDSKKDIELIITELQKNP-LN--YTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 ++G K A R+ ++ I+ L + P +N V V+ D L+ D L ++ +KF + ++ PT+ ++ P + + E L YE + E ++ E Q ++ AV+EN +EQ ARM AM +++ NAG+++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 117 VVGSKGAAFF-RNFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEG-RIDRLSVVSNKFINTMTQQPTVEQLI-PLVATPDQELKHHWDYL--YEPDAKELLDGLMVRYVESQ----VYQAVVENNAAEQAARMIAMKNATDNAGDLISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PSEAE (ATP synthase gamma chain OS=Pseudomonas aeruginosa GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 14 KSLHKLNSGPDKENKYV---ILGEKAKAILVRDSKKDIELIITELQKNP-LN--YTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 KSL K SG ++ + ++G K A R ++ I+ L + P +N V V+ D L+ D L ++ +KF + ++ PT+ ++ P + + + E L YE + +L E Q ++ AV+EN EQ ARM AM +++ NAGE++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 97 KSLVKDMSGYREQGAEIDLCVIGSKG-ASFFRSFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEG-RIDRLFVVSNKFVNTMTQKPTVEQLI-PLVADDDQELKHHWDYL--YEPDAKSLLDGLLVRYVESQ----VYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PSEAB (ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 14 KSLHKLNSGPDKENKYV---ILGEKAKAILVRDSKKDIELIITELQKNP-LN--YTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 KSL K SG ++ + ++G K A R ++ I+ L + P +N V V+ D L+ D L ++ +KF + ++ PT+ ++ P + + + E L YE + +L E Q ++ AV+EN EQ ARM AM +++ NAGE++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 97 KSLVKDMSGYREQGAEIDLCVIGSKG-ASFFRSFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEG-RIDRLFVVSNKFVNTMTQKPTVEQLI-PLVADDDQELKHHWDYL--YEPDAKSLLDGLLVRYVESQ----VYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PSEA8 (ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain LESB58) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 14 KSLHKLNSGPDKENKYV---ILGEKAKAILVRDSKKDIELIITELQKNP-LN--YTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 KSL K SG ++ + ++G K A R ++ I+ L + P +N V V+ D L+ D L ++ +KF + ++ PT+ ++ P + + + E L YE + +L E Q ++ AV+EN EQ ARM AM +++ NAGE++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 97 KSLVKDMSGYREQGAEIDLCVIGSKG-ASFFRSFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEG-RIDRLFVVSNKFVNTMTQKPTVEQLI-PLVADDDQELKHHWDYL--YEPDAKSLLDGLLVRYVESQ----VYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PSEA7 (ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain PA7) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 14 KSLHKLNSGPDKENKYV---ILGEKAKAILVRDSKKDIELIITELQKNP-LN--YTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 KSL K SG ++ + ++G K A R ++ I+ L + P +N V V+ D L+ D L ++ +KF + ++ PT+ ++ P + + + E L YE + +L E Q ++ AV+EN EQ ARM AM +++ NAGE++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 97 KSLVKDMSGYREQGAEIDLCVIGSKG-ASFFRSFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEG-RIDRLFVVSNKFVNTMTQKPTVEQLI-PLVADDDQELKHHWDYL--YEPDAKSLLDGLLVRYVESQ----VYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PROMM (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9313) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 55/197 (27.92%), Postives = 97/197 (49.24%), Query Frame = 2 Query: 62 VILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDS-YEIEGG-----------------ETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGA 583 V++G KA R S+ I T L++ P + S+ + + + + D + +IY+KF ++VS P + T+L P+ + + +L DS +E G ++ ++L L M A+ E+A SE +RM+AM+++S NA + LTL YN+ RQA+IT E++E++ G+ Sbjct: 118 VLIGRKAITYFSNRSSQYTIRATFTGLEQVPTSDDAESITTEVLAEFLSQSTDRIEVIYTKFINLVSCNPVVQTLLPLDPQGIAEADDEIFRLTTKDSRLTVEKGVGPANEQPPLPSDIIFEQSPEQLLNALLPLYLQNQMLRALQESAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVVGGS 314
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_PROM3 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9303) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 55/197 (27.92%), Postives = 97/197 (49.24%), Query Frame = 2 Query: 62 VILGEKAKAILV-RDSKKDIELIITELQKNPLNYTQVSVLADDILK--NVEFDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDS-YEIEGG-----------------ETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGA 583 V++G KA R S+ I T L++ P + S+ + + + + D + +IY+KF ++VS P + T+L P+ + + +L DS +E G ++ ++L L M A+ E+A SE +RM+AM+++S NA + LTL YN+ RQA+IT E++E++ G+ Sbjct: 118 VLIGRKAITYFSNRSSQYTIRATFTGLEQVPTSDDAESITTEVLAEFLSQSTDRIEVIYTKFINLVSCNPVVQTLLPLDPQGIAEADDEIFRLTTKDSRLTVEKGVGPANEQPPLPSDIIFEQSPEQLLNALLPLYLQNQMLRALQESAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVVGGS 314
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_POLSJ (ATP synthase gamma chain OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 185 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 D + +A+ + Y+KF + + P + +L +A+ + G YE + ++L E +++ AV EN SEQ ARM AM +++ NAG ++ L L YN+TRQA+IT EL EI++GA+A+ Sbjct: 158 DAYSEGKINAVYLCYTKFINTMRQEPVVEQLLPLTAAHLQADKD-QHGWDYIYEPDAQTVIDDLLLRYVE----ALIYQAVAENMASEQSARMVAMKAATDNAGSVIGELKLIYNKTRQAAITKELSEIVAGAAAV 288
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_METFK (ATP synthase gamma chain OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 59/200 (29.50%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 5 KISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNP---LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 ++S + K G K+ +G K L R + D++ +T L P + V+ D + E D L I Y++F + + + VL + E + G D YE + E++ E ++++AV EN SEQ ARM AM ++S NA ++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 98 RLSINQMKAWEGEGKKTIVSAIGNKGFTYLNRINA-DVKSHVTGLGDTPHLEKLIGTIKVMLDAYIAG-EIDQLHICYTRFLNTMKQEAVIEQVLPLSDDKLETSATTAKGHWDYIYEPDANVVIDELMTRYIE----TIIYHAVTENMASEQSARMVAMKAASDNAKNVIGELKLVYNKARQAAITKEISEIVGGAAAV 291 The following BLAST results are available for this feature:
BLAST of FC872689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872689 ID=FC872689; Name=FC872689; organism=Citrus clementina; type=EST; length=827bpback to top |