FC872689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_AGRT5 (ATP synthase gamma chain OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=atpG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.272e-22 Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 2 Query: 74 EKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 E A I+ R +D++ + E N Q++ + EFD +IYS+F SV+S +PT ++ EA + + YE E IL++L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL Sbjct: 131 EFASLIIERIELRDVKKVGFE------NADQIAKKVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAATPVVEA---AETTQTAVYEYE--PDAASILEDLIPRNISVQVFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHISN (ATP synthase gamma chain OS=Rhizobium sp. (strain NGR234) GN=atpG PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.661e-22 Identity = 75/189 (39.68%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS----YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ I + + E++K N ++ ++ + EFD + YS+F SV+S +PT ++ A +G E DS YE E IL +L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL YNR RQA IT ELIEIISGA AL Sbjct: 114 KTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFEKGEFDVCTLFYSEFKSVISQVPTAQQLIP-------ASAGPVAAEADSASAVYEYE--PDAAAILTDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 293
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPT (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain TIE-1) GN=atpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.169e-22 Identity = 75/189 (39.68%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K+ +G K L R+ +K I + + + V A+DI K V EFD + YS+F SV+S +PT ++ E+ A + G + YE E + EIL L + +F A+LEN S GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+ Sbjct: 114 KTVKFFCVGRKGYEQLRRNFEKQIIDNVELRSVRQIGF----VNAEDIAKKVIARFNAGEFDVCTLFYSRFKSVISQIPTAQQLIPLEVT---APAAGTVATSYEYEPE----EDEILSGLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEIISGAEAI 291
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPA (ATP synthase gamma chain OS=Rhodopseudomonas palustris GN=atpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.169e-22 Identity = 75/189 (39.68%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K+ +G K L R+ +K I + + + V A+DI K V EFD + YS+F SV+S +PT ++ E+ A + G + YE E + EIL L + +F A+LEN S GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+ Sbjct: 114 KTVKFFCVGRKGYEQLRRNFEKQIIDNVELRSVRQIGF----VNAEDIAKKVIARFNAGEFDVCTLFYSRFKSVISQIPTAQQLIPLEVT---APAAGTVATSYEYEPE----EDEILSGLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEIISGAEAI 291
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_GEOSF (ATP synthase gamma chain OS=Geobacter sp. (strain FRC-32) GN=atpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.169e-22 Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 2 Query: 152 LNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVS---FLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 598 LNY ++LA ++++ EFD + IIY+ F SV+S L + V PE + E YE E GE+L E Q +F ++LE+ SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G Sbjct: 143 LNYQTAALLAQEVIQGYLDEEFDEVFIIYNAFRSVMSQDITLEQLLPVTPPEAADEE------YAPEYIYEPSKSELLGELLPKHIEVQ----IFKSLLESVASEHGARMTAMDSASKNANEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_SPHAL (ATP synthase gamma chain OS=Sphingopyxis alaskensis GN=atpG PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 70/186 (37.63%), Postives = 105/186 (56.45%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLS-PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K+ + ++G K + ++ R I + + Q S ++ +++ E FD + YSKF S + + T ++ P E A SG + E E GE EIL +L + +F +LENA SEQGA M+AMD+++RNAGE++++LT+ YNRTRQA+ITTELIEII+GA AL Sbjct: 114 KKVLFYLVGRKGRPVIARLFPGQIIEQYDTTGIRDIGFDQASEISARVMELYEAGAFDVAHLFYSKFRSALLQIATGQQMIPVPPPAEAPASSGAAV------EYEPGEE--EILADLLPRNVTIQIFKGLLENAASEQGASMTAMDNATRNAGELINKLTIIYNRTRQAAITTELIEIIAGAEAL 291
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUME (ATP synthase gamma chain OS=Brucella melitensis GN=atpG PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUMB (ATP synthase gamma chain OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=atpG PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUAB (ATP synthase gamma chain OS=Brucella abortus GN=atpG PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BRUA2 (ATP synthase gamma chain OS=Brucella abortus (strain 2308) GN=atpG PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S + T A L P + EAE + YE + IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 113 KTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292 The following BLAST results are available for this feature:
BLAST of FC872689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872689 ID=FC872689; Name=FC872689; organism=Citrus clementina; type=EST; length=827bpback to top |