FC872701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.083e-27 Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 286 GIGAG IP VL+V ++DEV+ VSS+E+I+ ++LLALKEGLLVGISSG I++AKRPENAGKL V +FPS GERYLST LF++ R E E+M Sbjct: 225 GIGAGFIPSVLEVDLIDEVVQVSSDESIDMARLLALKEGLLVGISSGAAAAAAIKLAKRPENAGKLFVAVFPSFGERYLSTVLFDATRKEAESM 318
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.764e-26 Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 286 GIGAG IP LD ++DEVI +SS+EA+ET++ LAL+EGLLVGISSG I+V KRPENAGKLI V+FPS GERYLS+ LF+SIR E E M Sbjct: 289 GIGAGFIPGNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLIGVVFPSYGERYLSSILFQSIREECEKM 382
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.132e-26 Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPID 295 GIGAG IP VL+V ++DEV+ VSS+E+I+ ++ LALKEGLLVGISSG I++A+RPENAGKL V IFPS GERYLST LF++ R E E M + Sbjct: 225 GIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFE 321
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26 Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPID 295 GIGAG IP VL+ ++DEV+ VSS+E+I+ ++LLA +EGLLVGISSG I++AKRPENAGKL V +FPS GERYLST LF++ R E E+M + Sbjct: 227 GIGAGFIPNVLETNLIDEVVQVSSDESIDMARLLAREEGLLVGISSGAAAAAAIKLAKRPENAGKLFVAVFPSFGERYLSTVLFDATRKEAESMTFE 323
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = 2 Query: 17 GVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 286 G IP LD ++DEVI +SS+EA+ET+K LAL+EGLLVGISSG I+VAKRPENAGKLI V+FPS GERYLS+ LF+SIR E E M Sbjct: 281 GFIPGNLDQDVMDEVIEISSDEAVETAKQLALQEGLLVGISSGAAALAAIQVAKRPENAGKLIAVVFPSFGERYLSSILFQSIREECEKM 370
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 286 G G +P +LDV +LDEV VS+ EAIE ++ LAL+EGLLVGISSG + +AKR ENAGKLI V+FPS GERY++TALF SI EV+ M Sbjct: 309 GDNPGYLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENAGKLITVLFPSHGERYITTALFSSINREVQEM 402
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIGAG +PPVLD ++DE+ITV +E+A+ ++ LA +EGLLVGISSG ++VA+RPENAGKLIVV+ P GERYLST LF + Sbjct: 222 GIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 308
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIGAG +PPVLD ++DE+ITV +E+A+ ++ LA +EGLLVGISSG ++VA+RPENAGKLIVV+ P GERYLST LF + Sbjct: 222 GIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 308
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20 Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIGAG +P VL + ++DE++TV +EEA++ ++ LA +EGLLVGIS+G + VA+RPEN GKLIVV+ P GERYLST LF + Sbjct: 222 GIGAGFVPSVLVLDLVDEIVTVGNEEALDLARRLAKEEGLLVGISAGAAVCAALHVARRPENTGKLIVVVLPDFGERYLSTMLFADL 308
BLAST of FC872701 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 5 GIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 265 GIGAG IP VLDV ++DEVI V+ EEAI + LA +EG+L GIS+G I+VAKRP N KLIV+I PS GERYLST LF+ + Sbjct: 225 GIGAGFIPEVLDVNLIDEVIAVTDEEAIAYGRRLAREEGILSGISTGAALAAAIKVAKRPANKDKLIVMIQPSFGERYLSTPLFQDL 311 The following BLAST results are available for this feature:
BLAST of FC872701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872701 ID=FC872701; Name=FC872701; organism=Citrus clementina; type=EST; length=680bpback to top |