FC872726

Overview
NameFC872726
Unique NameFC872726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.271e-14
Identity = 46/153 (30.07%), Postives = 85/153 (55.56%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 459
            DA  ++D+M + G  P++ T+  ++H L    +  EA ++  RM ++ G +P + TY +VV   C    +D+A  + ++M+A  +   + +++T+I+SLC    +DDA   F+EM   GIRP    +S+L   L   G   + + +L+  I+K
Sbjct:   98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249          

HSP 2 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 43/152 (28.29%), Postives = 79/152 (51.97%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            +A ++ D+M K  I P+  TY+ +++      R ++A  +F+ M  K    P + TY  +++ FC + +V+    ++ EM  RG++     Y+TLI  L H+   D+A K F++M+  G+ P    +S L   L + G  E A+ +   + K
Sbjct:  273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD-CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423          

HSP 3 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 40/138 (28.99%), Postives = 70/138 (50.72%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            +A  ++D M + G  PN  TY +V++ L K G  + A+++  +M      E  V  +  ++   C    VD A+ ++ EM+ +G+ P +  YS+LI+ LC   +  DA +   +M++  I P    F+ L  A   EG
Sbjct:  133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 44/138 (31.88%), Postives = 80/138 (57.97%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            DA  ++ +M + G  P+S T++ ++H L +  R  EA ++  RM  K G +P + TY IVV   C    +D+A+ +  +M+   + P + +Y+T+I++LC+   ++DA   F EM + GIRP    +++L + L + G
Sbjct:  169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305          

HSP 2 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 47/157 (29.94%), Postives = 81/157 (51.59%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            +A ++ DEM K  I P+  TY  +++      R +EA  +F+ M  K    P V TY  +++ FC   +VD  M ++ EM  RG++     Y+TLI+      + D+A   F++M+  G+ P    +S L   L + G  ETA+V+ + + + +  P
Sbjct:  344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 46/153 (30.07%), Postives = 85/153 (55.56%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 459
            DA  ++D+M + G  P++ T+  ++H L    +  EA ++  RM ++ G +P + TY +VV   C     D+A+ + ++M+A  +   + +++T+I+SLC    +DDA   F+EM   GIRP    +S+L   L   G   + + +L+  I+K
Sbjct:  173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324          

HSP 2 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 44/152 (28.95%), Postives = 79/152 (51.97%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            +A ++ D+M K  I P+  TY+ +++      R ++A  +F+ M  K    P V TY  +++ FC + +V+    ++ EM  RG++     Y+TLI  L H+   D+A K F++M+  G+ P    +S L   L + G  E A+ +   + K
Sbjct:  348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498          

HSP 3 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 41/138 (29.71%), Postives = 70/138 (50.72%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            +A  ++D M + G  PN  TY +V++ L K G T+ A ++  +M      E  V  +  ++   C    VD A+ ++ EM+ +G+ P +  YS+LI+ LC   +  DA +   +M++  I P    F+ L  A   EG
Sbjct:  208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP412_ARATH (Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 40/151 (26.49%), Postives = 82/151 (54.30%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP--GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            A  +   M   G+ PN RTY+++LH L   G+ ++A  +F+ M ++   G  P + TY +++   CYN +++ A+ ++++M+ R +   +  Y+ +I  +C   K+ +A   F  +   G++P    ++ +   L  EG++  A VL +K+
Sbjct:  371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521          

HSP 2 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 40/137 (29.20%), Postives = 68/137 (49.64%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            A   + +M K G  P+  T+  +++      R EEA S+  +M    G +P V  Y  ++   C N  V+ A+ ++D+M+  G+ P + MY++L+N LC+  +  DA    + M    I+P    F+ L  A   EG
Sbjct:  126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM-GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14
Identity = 45/151 (29.80%), Postives = 78/151 (51.66%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 456
            DA R+M +M    I PN  T+  V+   +K G+  EA  +++ M+R+   +P V TY  ++   C + +VD A ++ D M  +G LP +  Y+TLIN  C   ++D+  K F+EM   G+      ++ + Q     G  + A  +  ++D
Sbjct:  227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.832e-14
Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            +A  ++D+M   G  PN+ T++ ++H L    +  EA ++  RM  K G +P + TY +VV   C     D+A  + ++M+   + P + +Y+T+I+ LC    +DDA   F+EM   GIRP    +S+L   L + G
Sbjct:  169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305          

HSP 2 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 45/148 (30.41%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVLAQ 447
            A  +  EM   G+ PN  TY+ +L  L K G+ E+A  VF+ + R    EPT+ TY I++   C   +V+    ++  +  +GV P +  Y+T+I+  C +   ++A   F+EM + G  P    ++ L +A LRD   E +A ++ +
Sbjct:  450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596          

HSP 3 Score: 72.7886 bits (177), Expect = 1.554e-12
Identity = 45/150 (30.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            +A  ++D M   G  P+  TY +V++ L K G T+ A+++  +M +    EP V  Y  ++   C    +D A+ ++ EM+ +G+ P +  YS+LI+ LC+  +  DA +   +M++  I P    FS    AL D  ++E  +V A+K+
Sbjct:  204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS----ALIDAFVKEGKLVEAEKL 348          

HSP 4 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 480
            +A ++ DEM K  I P+  TY  +++      R +EA  +F+ M  K    P V TY  +++ FC   +V+  M ++ EM  RG++     Y+ LI  L      D A + F+EM+  G+ P    ++ L   L   G  E A+V+ + + + +  P +
Sbjct:  344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.699e-14
Identity = 46/153 (30.07%), Postives = 85/153 (55.56%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD-EGMEETAVVLAQKIDK 459
            DA  ++D+M + G  P++ T+  ++H L    +  EA ++  RM ++ G +P + TY +VV   C    +D+A  + ++M+A  +   + +YST+I+SLC     DDA   F EM + G+RP    +S+L   L + E   + + +L+  I++
Sbjct:  173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324          

HSP 2 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            +A  ++D M + G  PN  TY +V++ L K G  + A+++  +M      E  V  Y  V+   C     D A+ ++ EM+ +GV P +  YS+LI+ LC+ ++  DA +   +M++  I P    F+    AL D  ++E  +V A+K+
Sbjct:  208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN----ALIDAFVKEGKLVEAEKL 352          

HSP 3 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 43/159 (27.04%), Postives = 78/159 (49.06%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 480
            +A ++ DEM K  I P+  TY  +++      R +EA  +F+ M  K    P V TY  ++  FC   ++D  + ++ EM  RG++     Y+TLI+        D+A   F++M+  G+ P    ++ L   L   G  E A+V+ + + + +  P +
Sbjct:  348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505          

HSP 4 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 39/162 (24.07%), Postives = 81/162 (50.00%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 489
            +   +  EM + G+  N+ TY  ++H   +A   + A  VFK+M    G  P + TY  ++   C N +++ AM +++ ++   + P ++ Y+ +I  +C   K++D    F  +   G++P   +++ +      +G++E A  L +K+ +    PL D G
Sbjct:  418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE--DGPLPDSG 576          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.831e-14
Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIG-PNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 441
            A+ +++EM++ GI  PNS TY  ++  L    R++EA  +F+ M  K G  P   T+ +++  FC   +V+ A +I D MK  G  P ++ YS L+N  C   K+ +A + F E+   G++     ++ L       G  + A+ L
Sbjct:  215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.831e-14
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   25 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 369
            EM K G+  N RTY ++++ L K G  ++ + ++++M ++ G  P + TY  V+   C + +   A +++DEM+ RGV   +  Y+TLI  LC E KL++A K   +M   GI P
Sbjct:  223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM-QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336          

HSP 2 Score: 75.485 bits (184), Expect = 2.398e-13
Identity = 41/150 (27.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query:   10 YRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            + M ++M++ G+ PN  TY+ V++ L K GRT++A+ VF  M R+ G    + TY  ++   C   +++ A ++ D+MK+ G+ P +  Y+TLI+  C   KL  A    +++   G+ P    ++ L      +G    A  + +++++
Sbjct:  253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401          

HSP 3 Score: 72.7886 bits (177), Expect = 1.554e-12
Identity = 42/157 (26.75%), Postives = 79/157 (50.32%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            DA+++ DEMR+ G+  N  TY+ ++  L +  +  EA  V  +M +  G  P + TY  ++  FC   ++  A+ +  ++K+RG+ P +  Y+ L++  C +     A K  +EM + GI+P    ++ L          E A+ L   +++L   P
Sbjct:  286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 41/148 (27.70%), Postives = 79/148 (53.38%), Query Frame = 1
Query:   16 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            +++++   G  P+  T+ ++++ L +A   ++A+  FK M    G EP   TY I++R  C     D +++++ +MK  G+ P ++ Y+  I S C   K+  A +  + ML IG++P    +S L +AL + G E  A  +   I++
Sbjct:  482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW-GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628          
The following BLAST results are available for this feature:
BLAST of FC872726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PP101_ARATH1.271e-1430.07Pentatricopeptide repeat-containing protein At1g63... [more]
PPR99_ARATH1.661e-1431.88Pentatricopeptide repeat-containing protein At1g63... [more]
PPR90_ARATH1.661e-1430.07Pentatricopeptide repeat-containing protein At1g62... [more]
PP412_ARATH1.661e-1426.49Pentatricopeptide repeat-containing protein At5g41... [more]
PPR93_ARATH2.169e-1429.80Pentatricopeptide repeat-containing protein At1g62... [more]
PPR91_ARATH2.832e-1431.88Pentatricopeptide repeat-containing protein At1g62... [more]
PP102_ARATH3.699e-1430.07Pentatricopeptide repeat-containing protein At1g63... [more]
PP392_ARATH4.831e-1430.14Pentatricopeptide repeat-containing protein At5g18... [more]
PP306_ARATH4.831e-1434.78Pentatricopeptide repeat-containing protein At4g11... [more]
PP239_ARATH6.310e-1427.70Putative pentatricopeptide repeat-containing prote... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1DE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1DE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872726 ID=FC872726; Name=FC872726; organism=Citrus clementina; type=EST; length=609bp
GGGGATGCATATAGGATGATGGATGAGATGAGGAAGTGTGGCATTGGTCC
AAATTCTCGAACTTATGATATAGTTCTTCATCACCTAATAAAGGCTGGAA
GAACAGAAGAGGCTTATTCGGTTTTTAAGAGAATGAGTCGCAAGCCAGGG
ACTGAGCCAACTGTCAGTACCTATGAGATTGTAGTCAGGATGTTTTGCTA
CAACGCCCAAGTAGATATGGCGATGAGGATTTGGGATGAGATGAAGGCAA
GGGGAGTTCTTCCTGTAATGCACATGTACTCGACATTGATTAATAGCTTG
TGCCATGAGGACAAGCTAGATGATGCTTGCAAGTACTTTCAAGAGATGCT
GGATATTGGTATTCGACCTCCTGGGCAGTTGTTTAGTAATCTAAAACAAG
CTCTTCGAGATGAGGGAATGGAGGAAACTGCTGTTGTTTTGGCTCAGAAG
ATTGACAAATTGAGGAAAACTCCATTAGTTGATAGAGGTCAATGATAGGA
GAGACTCTAAAGCCCCTTTATTTATTTATTTTATGAATTAGCTCCAGAAC
AAGCTTTCAATGAACAGAGAGAAGTTCTGACAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
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