FC872726

Overview
NameFC872726
Unique NameFC872726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.241e-14
Identity = 39/147 (26.53%), Postives = 75/147 (51.02%), Query Frame = 1
Query:   10 YRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 450
            Y ++ EM++ G  P+ +TY+ ++  +      E    ++ +M +    EP++ T+ ++++ +      +M   +WDEM  +G+ P  + Y+ LI  L  E K  +AC+Y +EMLD G++ P   ++         G  E    LAQ+
Sbjct:  422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567          

HSP 2 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 39/150 (26.00%), Postives = 80/150 (53.33%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            +A R+ ++M   G+ P+   ++++L  L+++ +  +A  +F  M  K G  P V +Y I++R FC  + ++ A+  +D+M   G+ P   +Y+ LI     + KLD   +  +EM + G  P G+ ++ L + + ++ M E    +  K+
Sbjct:  315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 463          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.241e-14
Identity = 39/147 (26.53%), Postives = 75/147 (51.02%), Query Frame = 1
Query:   10 YRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 450
            Y ++ EM++ G  P+ +TY+ ++  +      E    ++ +M +    EP++ T+ ++++ +      +M   +WDEM  +G+ P  + Y+ LI  L  E K  +AC+Y +EMLD G++ P   ++         G  E    LAQ+
Sbjct:  423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568          

HSP 2 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 39/150 (26.00%), Postives = 80/150 (53.33%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            +A R+ ++M   G+ P+   ++++L  L+++ +  +A  +F  M  K G  P V +Y I++R FC  + ++ A+  +D+M   G+ P   +Y+ LI     + KLD   +  +EM + G  P G+ ++ L + + ++ M E    +  K+
Sbjct:  316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 464          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR95_ARATH (Pentatricopeptide repeat-containing protein At1g62915, mitochondrial OS=Arabidopsis thaliana GN=At1g62915 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 44/138 (31.88%), Postives = 76/138 (55.07%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            DA  ++D+M + G  P++ T+  ++H L    +  EA ++  RM ++ G +P + TY  VV   C     D+A+ + ++M+A  +   + +YST+I+SLC     DDA   F EM + G+RP    +S+L   L + G
Sbjct:  166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302          

HSP 2 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 44/156 (28.21%), Postives = 74/156 (47.44%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            A ++ +EM K  I PN  TY  +++      R  EA  + + M RK    P V TY  ++  FC   +VD  M ++ EM  RG++     Y+TLI+        D+A   F++M+ +G+ P    ++ L   L   G    A+V+ + + +    P
Sbjct:  342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 46/153 (30.07%), Postives = 77/153 (50.33%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            DAY ++DEM + G  P++ TY+ ++ +         A  +  RM R     P   TY +V+++     + D A  IW+ M  R   P +  Y+ +I+ L  +  KL++AC+YF+ M+D GI P       L+  L   G  +   VLA K+++
Sbjct:  331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL-PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    1 GDAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 369
            G+    +  + +  + P+  TY+ +L  L  +G+ ++A  V  RM ++    P V TY I++   C ++ V  AM++ DEM+ RG  P +  Y+ L+N +C E +LD+A K+  +M   G +P
Sbjct:  186 GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307          

HSP 2 Score: 75.8702 bits (185), Expect = 1.836e-13
Identity = 43/159 (27.04%), Postives = 79/159 (49.69%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 480
            +A + +++M   G  PN  T++I+L  +   GR  +A  +   M RK G  P+V T+ I++   C    +  A+ I ++M   G  P    Y+ L++  C E K+D A +Y + M+  G  P    ++ +  AL  +G  E AV +  ++     +P++
Sbjct:  292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449          

HSP 3 Score: 75.0998 bits (183), Expect = 3.132e-13
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 435
            A   ++ M   G  P+  TY+ +L  L K G+ E+A  +  ++S K G  P + TY  V+       +   A+++ DEM+A+ + P    YS+L+  L  E K+D+A K+F E   +GIRP    F+++   L      + A+
Sbjct:  398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539          

HSP 4 Score: 72.0182 bits (175), Expect = 2.651e-12
Identity = 42/158 (26.58%), Postives = 80/158 (50.63%), Query Frame = 1
Query:    1 GDAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            G A  ++++M + G  PNS +Y+ +LH   K  + + A    +RM  + G  P + TY  ++   C + +V+ A+ I +++ ++G  PV+  Y+T+I+ L    K   A K   EM    ++P    +S+L   L  EG  + A+    + +++   P
Sbjct:  361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 45/156 (28.85%), Postives = 82/156 (52.56%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            A+++ +EM   G   N   Y  ++H L  A R +EA  +F +M +     PTV TY ++++  C + +   A+ +  EM+  G+ P +H Y+ LI+SLC + K + A +   +ML+ G+ P    ++ L       GM E AV + + ++  + +P
Sbjct:  272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426          

HSP 2 Score: 68.5514 bits (166), Expect = 2.931e-11
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 432
            +A+ M+++M      PNS T++ ++H L   G+ +EA  + ++M  K G +PTVST  I++     +   D A   + +M + G  P  H Y+T I + C E +L DA     +M + G+ P    +S+L +   D G    A
Sbjct:  550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 39/147 (26.53%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   10 YRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 450
            Y ++ EM++ G  P+ +TY+ ++  +      E A  ++ +M +    EP++ T+ ++++ +      +M   +W+EM  +G+ P  + Y+ LI  L  E K  +AC+Y +EMLD G++ P   ++         G  E    LAQ+
Sbjct:  423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE-IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568          

HSP 2 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 40/150 (26.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            +A R+ ++M   G+ P+   ++++L  L+++ +  +A  +F  M  K G  P V +Y I++R FC  + ++ A+  +D+M   G+ P   +Y+ LI     + KLD   +  +EM + G  P G+ ++ L + + ++ M E A  +  K+
Sbjct:  316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.076e-13
Identity = 46/150 (30.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            DA R++D MR     P++ TY+I++  L   G+ + A  V  ++      +PTV TY I++        VD A+++ DEM +RG+ P M  Y+T+I  +C E  +D A +  + +   G  P    ++ L +AL ++G  E    L  K+
Sbjct:  176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324          

HSP 2 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 40/156 (25.64%), Postives = 79/156 (50.64%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            A+ M+  +   G  P+  +Y+I+L  L+  G+ EE   +  +M  +   +P V TY I++   C + +++ AM +   MK +G+ P  + Y  LI + C E +LD A ++ + M+  G  P    ++ +   L   G  + A+ +  K+ ++  +P
Sbjct:  282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436          

HSP 3 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 39/135 (28.89%), Postives = 71/135 (52.59%), Query Frame = 1
Query:   13 RMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            ++M +M      PN  TY I++  L + G+ EEA ++ K M  K G  P   +Y+ ++  FC   ++D+A+   + M + G LP +  Y+T++ +LC   K D A + F ++ ++G  P    ++ +  AL   G
Sbjct:  319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452          

HSP 4 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 39/150 (26.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 456
            A R+M+ + K G  P+   Y+ +++   K  R ++A  V  RM  K  +  TV TY I++   C   ++D+A+++ +++ +    P +  Y+ LI +   E  +D+A K   EML  G++P    ++ + + +  EGM + A  + + ++
Sbjct:  143 AVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR92_ARATH (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.836e-13
Identity = 45/151 (29.80%), Postives = 77/151 (50.99%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 456
            DA R++ +M K  I PN  TY  +L   +K G+  EA  +F+ M R    +P + TY  ++   C + ++D A +++D M ++G L  +  Y+TLIN  C   +++D  K F+EM   G+      ++ L Q     G  + A     ++D
Sbjct:  243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP132_ARATH (Pentatricopeptide repeat-containing protein At1g79490, mitochondrial OS=Arabidopsis thaliana GN=EMB2217 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 360
            A R+ DEM+K G  PN   Y +++    K+G+ E A +VFK M  K G  PT STY  ++ M   + QVD AM+I++ M   G+ P +  Y +L+  L ++  +D A K   EM  +G
Sbjct:  402 ALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME-KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518          

HSP 2 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 39/151 (25.83%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            A+ + + M K     +  TY++++  L K+GR + A+ +F++M  +    P+ S +  +V       ++D +M+++ EM+  G  P   M+ +LI+S     KLD A + + EM   G RP   L++ + ++    G  E A+ + + ++K
Sbjct:  297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK-LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446          
The following BLAST results are available for this feature:
BLAST of FC872726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PP382_ARATH8.241e-1426.53Pentatricopeptide repeat-containing protein At5g14... [more]
PP294_ARATH8.241e-1426.53Pentatricopeptide repeat-containing protein At3g62... [more]
PPR95_ARATH1.076e-1331.88Pentatricopeptide repeat-containing protein At1g62... [more]
PPR78_ARATH1.076e-1330.07Pentatricopeptide repeat-containing protein At1g52... [more]
PPR28_ARATH1.076e-1330.89Pentatricopeptide repeat-containing protein At1g09... [more]
PP445_ARATH1.076e-1328.85Pentatricopeptide repeat-containing protein At5g65... [more]
PP293_ARATH1.076e-1326.53Pentatricopeptide repeat-containing protein At3g62... [more]
PP213_ARATH1.076e-1330.67Pentatricopeptide repeat-containing protein At3g04... [more]
PPR92_ARATH1.836e-1329.80Pentatricopeptide repeat-containing protein At1g62... [more]
PP132_ARATH2.398e-1337.29Pentatricopeptide repeat-containing protein At1g79... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1DE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1DE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872726 ID=FC872726; Name=FC872726; organism=Citrus clementina; type=EST; length=609bp
GGGGATGCATATAGGATGATGGATGAGATGAGGAAGTGTGGCATTGGTCC
AAATTCTCGAACTTATGATATAGTTCTTCATCACCTAATAAAGGCTGGAA
GAACAGAAGAGGCTTATTCGGTTTTTAAGAGAATGAGTCGCAAGCCAGGG
ACTGAGCCAACTGTCAGTACCTATGAGATTGTAGTCAGGATGTTTTGCTA
CAACGCCCAAGTAGATATGGCGATGAGGATTTGGGATGAGATGAAGGCAA
GGGGAGTTCTTCCTGTAATGCACATGTACTCGACATTGATTAATAGCTTG
TGCCATGAGGACAAGCTAGATGATGCTTGCAAGTACTTTCAAGAGATGCT
GGATATTGGTATTCGACCTCCTGGGCAGTTGTTTAGTAATCTAAAACAAG
CTCTTCGAGATGAGGGAATGGAGGAAACTGCTGTTGTTTTGGCTCAGAAG
ATTGACAAATTGAGGAAAACTCCATTAGTTGATAGAGGTCAATGATAGGA
GAGACTCTAAAGCCCCTTTATTTATTTATTTTATGAATTAGCTCCAGAAC
AAGCTTTCAATGAACAGAGAGAAGTTCTGACAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
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