FC872726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11 Identity = 41/148 (27.70%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 16 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459 M++E R C + +Y+ ++ K G + A + ++ M G P V TY ++ C N ++D A+ + DEMK +GV + Y LI+ C ++ A F E+L+ G+ P ++++L R+ G A+ L +K+ K Sbjct: 574 MIEEKRLC---VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11 Identity = 45/152 (29.61%), Postives = 74/152 (48.68%), Query Frame = 1 Query: 7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 459 A R ++M G+ P TY+++L + R E A F+ M + G P +T+ ++ FC ++D A +++ EMK + P + Y+T+I D++DD + F+EM GI P +S L L D G M E +L + K Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTR-GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11 Identity = 42/135 (31.11%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLFSNLKQ 399 A + DEM + + P+ TY ++++ KAGR E+A+ M +K G P V T+ ++ C +D A R +M+ G+ P + Y+ LI+ C +K ++ K ++EMLD I P G LF +L++ Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11 Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 46 GPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 441 GP+ TY+ ++H L G+ ++A V+ + + G EP STY I+++ C + ++D AMRI+ EM+ G +P +Y+ L++ K+ +AC+ F++M+ G+R ++ L L G E L Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDEL-KVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11 Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 393 A + +EMR G P+ TY++++ L G+ +EA ++ K+M G +V TY ++ FC + A I+DEM+ GV Y+TLI+ LC +++DA + +M+ G +P +++L Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 40/137 (29.20%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417 AY ++ ++ K G P++ T++ ++ L G+ EA + RM G +P V TY +V C + +A+ + +M+ R V + YST+I+SLC + +D A F+EM GI+ +++L + L G Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 38/121 (31.40%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 369 A+ + R G+ PN+R+Y++++ AY +F +M + P V +Y+I+++ FC QV+ AM + D+M +G +P Y+TL+NSLC + +L +A K M G P Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD-VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293 HSP 2 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 43/155 (27.74%), Postives = 72/155 (46.45%), Query Frame = 1 Query: 7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 471 A ++D+M G P+ +Y +L+ L + + EAY + RM K G P + Y ++ FC + A ++ D+M + G P Y TLI LC + D+ KY +EM+ G P + + L + G E A + + + K +T Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK-GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1 Query: 4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 480 +A + EMR GI + +Y+ +L K GR+EEA + + M+ G + V TY ++ + + D +++ EMK VLP + YSTLI+ +A + F+E G+R L+S L AL G+ +AV L ++ K +P V Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP100_ARATH (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 41/153 (26.80%), Postives = 84/153 (54.90%), Query Frame = 1 Query: 4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 459 DA ++D+M + G P++ T+ ++H L + EA ++ +M ++ G +P + TY VV C +D+A+ + ++M+A + + +++T+I+SLC ++ A F EM GIRP +++L L + G + + +L+ ++K Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05665, mitochondrial OS=Arabidopsis thaliana GN=At1g05665 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11 Identity = 39/123 (31.71%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 25 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 393 E + G+ N +Y+IV+H + + GR +EA+ + M K G P V +Y VV +C ++D ++ + MK +G+ P ++Y ++I LC KL +A + F EM+ GI P +++ L Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357 HSP 2 Score: 68.5514 bits (166), Expect = 2.931e-11 Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 426 DA+R+ + M + G PN TY ++ L K G + A + M K G +P + TY +V C + ++ A+++ E +A G+ Y+TL+++ C ++D A + +EML G++P F+ L GM E Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578 HSP 3 Score: 68.1662 bits (165), Expect = 3.828e-11 Identity = 31/130 (23.85%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 393 +A +++ E G+ ++ TY ++ K+G ++A + K M K G +PT+ T+ +++ FC + ++ ++ + M A+G+ P +++L+ C + L A +++M G+ P G+ + NL Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637 The following BLAST results are available for this feature:
BLAST of FC872726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872726 ID=FC872726; Name=FC872726; organism=Citrus clementina; type=EST; length=609bpback to top |