FC872847

Overview
NameFC872847
Unique NameFC872847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length964
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: EPHA7_HUMAN (Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.970e-12
Identity = 60/208 (28.85%), Postives = 107/208 (51.44%), Query Frame = 2
Query:  194 IIGTGRTGATYIAML--PG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 790
            +IG G  G      L  PG     + IK L+   ++   ++FL E + +G   H N+V L G     K  ++V  ++ENG L  + + H  +  V+ +   LR     G A G+ +L    +   +HR+++++ IL++ +   K+SDFGL+R++      + T   G+   + + APE  +    T   DV+S+G+V+ E+++ GERP
Sbjct:  638 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR-----GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI-PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 836          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: STE20_CANGA (Serine/threonine-protein kinase STE20 OS=Candida glabrata GN=STE20 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 75/263 (28.52%), Postives = 120/263 (45.63%), Query Frame = 2
Query:   44 KKKEDDPEGNKWAKRIKGTKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEF-LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSA-----RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAP 811
            +KK+++ E NK     K T+            K +  DL+K          IG G +G  YIA        + IK++   +  +KE  L+EI  +   +H N+V  +   +AK +  +V  Y+E G+L D        V H    L     IG+      +GL +LH   +  ++HR+I S  ILL      KL+DFG    +N  +   +T V   +    ++APE        PK D++S G++++E+I GE P +L   P
Sbjct:  590 EKKKEERERNKKLLYAKLTE-----ICSPGDPKSKYRDLIK----------IGQGASGGVYIAHDTESEDSVAIKQMNLEKQPKKELILNEILVMRESKHSNIVNFIDSYLAKGDLWIVMEYMEGGSLTD-------VVTHC---LLSEGQIGAVCRETLKGLQFLH---SKGVLHRDIKSDNILLSLKGNIKLTDFGFCAQINENNLKRTTMVGTPY----WMAPEVVSRKEYGPKVDIWSLGIMIIEMIEGE-PPYLNETP 819          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: RCKA_DICDI (RGS domain-containing serine/threonine-protein kinase A OS=Dictyostelium discoideum GN=rckA PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            I +G +G  Y     G    I +   E   H +  EF  E+  +   +H NL   LG      +   +  Y  NG+L+  L    + +    +  RL  A+G ARG+ +LH   +  IIHR++ S  ILL    + K+ DFG +R+ N  +  ++T V    G   ++APE   +   T K DVYS+ ++L E+ T
Sbjct:  848 IASGSSGRVYNGQYKGKDVAIKVLGPEVCVHFDLNEFKREVALMSIFKHDNLARCLGAGQYDDKYFHLTEYCHNGSLFSYLRDQRNNI---SFGQRLHFALGIARGMRYLH---SMSIIHRDLKSMNILLTKRLKIKIVDFGTSRVANKYN--MTTHV----GTQAWMAPEIFTSRTYTNKVDVYSYAIILFEIFT 1031          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: PR2_DROME (Tyrosine-protein kinase PR2 OS=Drosophila melanogaster GN=PR2 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 73/263 (27.76%), Postives = 111/263 (42.21%), Query Frame = 2
Query:   32 GVYVKKKEDDPEGNKWAKRIKGTKGIKVSAFEKSVEKMRLSDLMKATN--------SFSKNNIIGTGRTGATYIAMLPGG---CFIMIKRL--EDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFG-DLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            G  VK++E    G++ A       G   SA      K   S   K  N        S S N  +GTG  G     +   G     + IK L  E  Q +  EFL E   + S+ H N+V L G  +A    +LV       +L + L  +   V  +  P     A+    G+ +L      R+IHR+++++ IL+    + K+SDFGL+R +     +  T  N      + + APE    L  T   DV++FGV L E+ +
Sbjct:   81 GTMVKREEAPGGGSQVA-----LDGSSASACSSLAAKNGASSPSKVPNNKHIIPADSISVNKQLGTGEFGIVQQGVWSNGNERIQVAIKCLCRERMQSNPMEFLKEAAIMHSIEHENIVRLYGVVLATDSLMLVTELAHLRSLLECLKDSGLRVSFLTIPTLCEFALQICNGMRYLEQK---RLIHRDLAARNILVFSKDKVKISDFGLSRALGVGKDYYKTNFNVNLKLPIAWCAPECINYLRFTNASDVWAFGVCLWEMFS 335          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 63/212 (29.72%), Postives = 98/212 (46.23%), Query Frame = 2
Query:  194 IIGTGRTGATYIAMLPGGCFIMIKRL-----EDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-----DGDFEPKL---SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 790
            IIG G  G  Y A   G   + +K       ED   + +    E      ++H N++ L G C+ +    LV  +   G L   L         +   + +  A+  ARG+ +LH      IIHR++ S  IL+     +GD   K+   +DFGLAR     + H +T ++   G   ++APE  R  + +   DV+S+GV+L EL+TGE P
Sbjct:  142 IIGIGGFGKVYRAFWAGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-----IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILEITDFGLAR-----EWHRTTKMSAA-GTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 341          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: IPL1_ASHGO (Spindle assembly checkpoint kinase OS=Ashbya gossypii GN=IPL1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 59/211 (27.96%), Postives = 99/211 (46.92%), Query Frame = 2
Query:  179 FSKNNIIGTGRTGATY-IAMLPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH--EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 790
            F    ++G G+ G  Y +  +  G    +K +E       + EK+F  E+    S+RH NL  L G+   +K   L+  YL NG LY  L    H  +V+   +  ++      A  L ++H      I+HR+I  + I++  +   KL+DFG + ++ P  +   T      G + Y++PE  R+     K DV++ GV+  EL+ G  P
Sbjct:  109 FEIGKVLGKGKFGRVYCVRHIESGFVCALKAMEKKDIIQYNIEKQFRREVEIQSSLRHPNLTQLYGYFHDEKRVYLLMEYLVNGELYKHLKGRSHFNDVVASYYVYQM------ADALDYMHER---NILHRDIKPENIIIGFNNTIKLTDFGWS-VITPKGSKRKTLC----GTVDYLSPELIRSREYNEKVDVWALGVLTYELLVGSPP 305          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: EGFR_DROME (Epidermal growth factor receptor OS=Drosophila melanogaster GN=Egfr PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 61/213 (28.64%), Postives = 112/213 (52.58%), Query Frame = 2
Query:  185 KNNIIGTGRTGATYIAM-LPGG----CFIMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMH---MDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 790
            K  ++G G  G  Y  + +P G      + IK L  S  +E  +EFL E   + S  H NL+ LL  C++  + +L+   +  G L D +     ++     ++W  ++      A+G+++L      R++HR+++++ +L+      K++DFGLA+L++  D++      G+   + ++A E  R  V T K DV++FGV + EL+T G+RP
Sbjct:  940 KGGVLGMGAFGRVYKGVWVPEGENVKIPVAIKELLKSTGAESSEEFLREAYIMASEEHVNLLKLLAVCMSS-QMMLITQLMPLGCLLDYVRNNRDKIGSKALLNWSTQI------AKGMSYLEEK---RLVHRDLAARNVLVQTPSLVKITDFGLAKLLSS-DSNEYKAAGGKM-PIKWLALECIRNRVFTSKSDVWAFGVTIWELLTFGQRP 1140          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: BTKL_DROME (Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 51/199 (25.63%), Postives = 103/199 (51.76%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 790
            +G+G+ G        G     +K +++   SE +F+ E   +  ++H NLV L G C   +   +V  Y+++G+L + L   E  ++  +  L L + I  ++G+ +L  +     IHR+++++  L+  +   K++DFGLAR +  +D   ++    +F  + +  PE       + K DV+++GV++ E+ T G+ P
Sbjct:  532 LGSGQFGVVRRGKWRGSIDTAVKMMKEGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIG-NMGLLLDMCIQVSKGMTYLERH---NYIHRDLAARNCLVGSENVVKVADFGLARYV--LDDQYTSSGGTKF-PIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFTCGKMP 723          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: ABL2_MOUSE (Tyrosine-protein kinase ABL2 OS=Mus musculus GN=Abl2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 56/195 (28.72%), Postives = 93/195 (47.69%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            +G G+ G  Y+ +       + +K  ++     +EFL E   +  ++H NLV LLG C  +    +V  Y+  G L D L     E +     L +   I SA     + +      IHR+++++  L+  +   K++DFGL+RLM   DT+  T   G    + + APE       + K DV++FGV+L E+ T
Sbjct:  294 LGGGQYGEVYVGVWKKYSLTVAVKTFKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSA-----MEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 480          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: YES_XENLA (Tyrosine-protein kinase Yes OS=Xenopus laevis GN=yes1 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 3.360e-12
Identity = 67/230 (29.13%), Postives = 106/230 (46.09%), Query Frame = 2
Query:   98 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 787
            T+G+   A+E   E +RL   +            G G  G  +I    G   + IK L+      + FL E   +  +RH  LVPL    V+++   +V  Y+  G+L D L   E    ++  P  + +A   A G+A++        IHR++ +  IL+  +   K++DFGLARL   I+ +  T   G    + + APE       T K DV+SFG++L EL+   R
Sbjct:  256 TQGLAKDAWEIPRESLRLDVKL------------GQGCFGEVWIGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYA-VVSEEPIYIVTEYMIKGSLLDFL--KEGNGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVAKGR 464          
The following BLAST results are available for this feature:
BLAST of FC872847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA7_HUMAN1.970e-1228.85Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 ... [more]
STE20_CANGA2.573e-1228.52Serine/threonine-protein kinase STE20 OS=Candida g... [more]
RCKA_DICDI2.573e-1230.10RGS domain-containing serine/threonine-protein kin... [more]
PR2_DROME2.573e-1227.76Tyrosine-protein kinase PR2 OS=Drosophila melanoga... [more]
M3K9_MOUSE2.573e-1229.72Mitogen-activated protein kinase kinase kinase 9 O... [more]
IPL1_ASHGO2.573e-1227.96Spindle assembly checkpoint kinase OS=Ashbya gossy... [more]
EGFR_DROME2.573e-1228.64Epidermal growth factor receptor OS=Drosophila mel... [more]
BTKL_DROME2.573e-1225.63Tyrosine-protein kinase Btk29A OS=Drosophila melan... [more]
ABL2_MOUSE2.573e-1228.72Tyrosine-protein kinase ABL2 OS=Mus musculus GN=Ab... [more]
YES_XENLA3.360e-1229.13Tyrosine-protein kinase Yes OS=Xenopus laevis GN=y... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AB03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2AB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872847 ID=FC872847; Name=FC872847; organism=Citrus clementina; type=EST; length=964bp
GGGGGGTATTTTTCTGTTTTGCTTCATGCGTGGTGTGTACGTTAAGAAGA
AGGAAGATGACCCTGAGGGCAACAAATGGGCAAAAAGGATAAAAGGAACA
AAGGGCATCAAGGTTTCAGCATTTGAGAAGTCAGTTGAAAAAATGAGGTT
GAGCGATCTTATGAAAGCGACTAATAGCTTTAGCAAAAACAACATCATTG
GGACAGGAAGAACGGGGGCAACGTACATAGCAATGCTTCCAGGTGGTTGT
TTCATAATGATCAAGAGGTTGGAAGACTCTCAGCATTCGGAGAAAGAATT
TTTGTCTGAAATCAATACTCTAGGGAGCGTTAGACACCGCAACTTGGTTC
CTCTTTTGGGTTTTTGCGTGGCAAAGAAGGAAAGACTTTTGGTGTACAGT
TACCTGGAAAATGGGACACTTTACGATAAACTACATCCAGCAGAACACGA
GGTCATGCACATGGACTGGCCTTTGAGGCTCCGAATTGCAATTGGATCAG
CTAGAGGTCTGGCATGGCTCCATCACAACTGTAACCCTCGGATTATACAT
AGAAACATAAGCTCTAAATGCATTCTGTTGGATGGTGATTTTGAACCGAA
GTTGTCTGATTTTGGCCTTGCAAGGCTTATGAACCCAATTGACACTCATT
TGAGTACTTTTGTCAATGGGGAGTTCGGAGATTTAGGTTATGTTGCTCCT
GAATATCCACGGACGCTGGTAGCCACCCCAAAGGGGGATGTTTATAGCTT
TGGAGTTGTTCTCCTGGAACTGATCACAGGTGAGAGACCAACTCATTTAA
CTAATGCCCCTGAGAGCTTCGAGGGAAGTTTAGTGGAGTGGATCACACTT
CTGAACACTAACTCTTCTCTGGAAACTGCAGTTGATAAGTCCCTGCTTGG
AAATGGTTTTGATGGTGAACTCCACCAATTTCTTAAGGGTTGCTTGTAAC
TGTGTGTTGCCAAC
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