FC872848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 179.104 bits (453), Expect = 2.008e-44 Identity = 92/192 (47.92%), Postives = 131/192 (68.23%), Query Frame = 1 Query: 19 VYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 582 +YD E+ INF+VFP QGGPHNH + ALA ALKQA+TP FK Y +QV NA AL + T KGY LV+ GT++H+VL L+ + G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RGL E+DF++I ++ AV E+Q + K LKDF + + + ++A++ ++ ++A SF + Sbjct: 277 LYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQVLKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSEKLKAVRDEIYQWAGSFPL 468
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44 Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 1 Query: 19 VYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ----KEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMP 585 +Y+ EDKINF+VFP QGGPHNH + ALAVAL QA TP F Y K V +NA A+ N +GY LV+GGT+ HLVL DL G+ G +VE++ +L NI+ NKN V GD SAL P G+R+GTPA T+RG EKDFE++ E + V+LT +I KE +DF K V + +I LK +V +A FD P Sbjct: 276 LYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDF-KAYVGDGSKFSEIAKLKKEVITWAGKFDFP 471
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 85/196 (43.37%), Postives = 127/196 (64.80%), Query Frame = 1 Query: 22 YDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ-------KEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 588 + F+ INF+VFP QGGPHNH + ALAVALKQA TP F Y KQV +NA A G+ L +G+ LV+GGT+NHL+L +L +G+ G ++E + + NI NKN + GD SAL P G+R+GTPAMT+RG E+DF+++ E++ AV L++ ++ K+ L F + ++ ++ L +V + +F +PG Sbjct: 288 FTFDKTINFSVFPGHQGGPHNHTISALAVALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSFKQLCDQSEPVQKLAEEVSSWVGTFPVPG 483
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 89/192 (46.35%), Postives = 125/192 (65.10%), Query Frame = 1 Query: 19 VYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKDI-EALKADVEKFASSFDM 582 +YD E+ INF+VFP QGGPHNH + ALA ALKQA+TP FK Y QV NA AL + GY LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++++AV ++Q+ K LKDF + D+ K ++ +A + + Sbjct: 276 LYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLNTWKKEIYDWAGEYPL 467
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.329e-42 Identity = 88/193 (45.60%), Postives = 122/193 (63.21%), Query Frame = 1 Query: 22 YDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNK---DIEALKADVEKFASSFDM 582 YD EDKINF+VFP QGGPHNH + ALAVALKQ PA+K Y QV NA +GY L GT++H+VL D++ G+ G + E++ +L NI NKN V D SA +P G+R+GTPAMT+RG E+DF ++ +++ RA+T +QKE K LKDF L + ++ L+ +V ++ASSF + Sbjct: 271 YDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAEWASSFPL 463
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.714e-41 Identity = 87/197 (44.16%), Postives = 122/197 (61.93%), Query Frame = 1 Query: 19 VYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD-------IEALKADVEKFASSFDMPG 588 +YD + +INF+VFP QGGPHNH + ALAVALKQA+TP FK Y V NA G L KG+ LV+GGT+ HL+L +L LG+ G ++E L + NI NKN + GD SAL P G+R+GTPAMT+RG ++F Q+ ++ RAV L + I+ + KD L + K+ ++ L +V ++ F +PG Sbjct: 300 LYDLDKRINFSVFPGHQGGPHNHTISALAVALKQAATPEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETLLENINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQESPDAKDARSKLASFKELCKESDQVKQLADEVYQWVGEFPVPG 496
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.545e-41 Identity = 90/191 (47.12%), Postives = 121/191 (63.35%), Query Frame = 1 Query: 22 YDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 582 YD E+ INF+VFP QGGPHNH + ALA ALKQA+TP FK Y QV NA AL N GY LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I ++ +AV + Q K LKDF + D + LK ++ + + + + Sbjct: 277 YDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKAKVDEIADQLAPLKKEIYDWTAEYPL 467
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.898e-41 Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 1 Query: 19 VYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFAS 570 +YD + +INF+VFP+ QGGPHNH + ALAVALKQA+TP FK Y V NA G L+ +G+SLV+GGT+ HL+L DL P+G+ G+++E + + NI NKN + GD SAL P G+R+GTPAMT+RG +F ++ +++ AV L + ++ + KD L + K A V K A+ Sbjct: 299 MYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAATPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQEPVDAKDAKTRLAHFKSFCAESEQVTKLAN 482
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40 Identity = 89/196 (45.41%), Postives = 121/196 (61.73%), Query Frame = 1 Query: 10 EGAVYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDMP 585 E +YD E INF+VFP QGGPHNH + ALA ALKQA+TP F+ Y + V NA L Y LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++RAV + IQ+ K LKDF + D I L ++ + + +P Sbjct: 273 EEVMYDLEGPINFSVFPGHQGGPHNHTISALATALKQATTPEFREYQELVLKNAKVLETEFKKLNYRLVSDGTDSHMVLVSLREKGVDGARVEHVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQSLPKEANRLKDFKAKVEGGTDEIAQLAQEIYSWTEEYPLP 468
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.001e-40 Identity = 85/194 (43.81%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 22 YDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ-KEYGK----LLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 588 Y+ E KINF VFP QGGPHNH + ALAVALKQ + P + Y ++V +NA + L KG+ LV+ GT+ HL+L DLR + G +VE + + NI NKN V GD SAL P G+R+GTPAMT+RG ++F+++ EF+ +AV + +E++ +E GK LL F K + ++ L +V + S + +PG Sbjct: 298 YELERKINFLVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVVSNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491 The following BLAST results are available for this feature:
BLAST of FC872848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872848 ID=FC872848; Name=FC872848; organism=Citrus clementina; type=EST; length=704bpback to top |