FC872848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RICCN (Serine hydroxymethyltransferase OS=Rickettsia conorii GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29 Identity = 74/174 (42.53%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 555 KIN A+FP LQGGP H + A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G ++ D GL NN+D AL+ V Sbjct: 250 KINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH------------------MVADILDGLKNNEDNSALEQKV 405
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RICAE (Serine hydroxymethyltransferase OS=Rickettsia africae (strain ESF-5) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29 Identity = 74/174 (42.53%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 555 KIN A+FP LQGGP H + A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G ++ D GL NN+D AL+ V Sbjct: 250 KINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH------------------MVADILDGLKNNEDNSALEQKV 405
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_NITWN (Serine hydroxymethyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29 Identity = 73/152 (48.03%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK 489 K N A+FP LQGGP H + A AVAL +A P FK YAK V NA AL L G G+ +V+GGT+NHL+L DLRP GL GN EK +T NKN + F G+R+GTPA T+RG +F+Q+G + A LT Q E GK Sbjct: 261 KFNSAIFPGLQGGPLMHVIAAKAVALGEALRPDFKIYAKNVVENARALAESLRGHGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGLTCNKNGIPFDPEKPFVTSGLRLGTPATTTRGFGVSEFKQVGGLI--AEVLTAIAQAEDGK 410
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CARHZ (Serine hydroxymethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29 Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 KI+ VFP +QGGP H + A AVA K+A +P F+ Y +QV NA AL L +G LV+GGT+NHL+L D+RP+GLTG + E+L D +TVNKNA+ + S G+RIGTPA+T+RG+ E + +I E + Sbjct: 249 KIDKTVFPGVQGGPLMHVIAAKAVAFKEALSPEFREYQQQVVNNAKALAEELKKQGLRLVSGGTDNHLMLVDVRPVGLTGKRAEQLLDEIGVTVNKNAIPYDPESPNVTSGIRIGTPAVTTRGMKEGEMAEIAEII 384
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_SORC5 (Serine hydroxymethyltransferase OS=Sorangium cellulosum (strain So ce56) GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 40 INFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 I+ AVFP LQGGPHNH A+AVA K+AS F+AYA+Q+ NA ALG L +G+ L+TGGT+NHL+L D+ P G+ G + D I N N++ F P G+RIGTPA+TSRG+ + E++ ++ Sbjct: 255 IDKAVFPGLQGGPHNHTTAAIAVAAKEASEEGFRAYARQIVVNAQALGRALESRGFRLITGGTDNHLLLIDMTPKGIAGKPYAQALDRAGIVANYNSIPFDPRKPFDPSGLRIGTPAVTSRGMGVAEMERLAAWM 389
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 67/140 (47.86%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 D KIN A+FP +QGGP H + AVA +A P FK Y KQV NA ALG L G++LV+GGT+ HLVL DLRP LTG K EK NIT NKN + F + G+R+G+PA T+RG +F++IG + Sbjct: 258 DIAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALRPDFKVYIKQVMDNARALGEVLVQNGFALVSGGTDTHLVLVDLRPKKLTGTKAEKALGRANITCNKNGIPFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIGRLI 397
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 68/156 (43.59%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 31 EDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLL 495 E K+N ++FP QGGP H + A A+ K+A +FK YA ++ +NA AL N LT +G++LV+GGT+NHL+L DL+ + +TG + E + D NIT NKN V D +S G+R+GTPA+T+RG EKD + E + V ++ KE K L Sbjct: 247 EHKLNKSIFPGTQGGPLMHVIAAKAICFKEALDDSFKDYAGKIISNAGALANELTARGFNLVSGGTDNHLMLIDLQNMNITGKEAEHILDEANITCNKNTVPNDPASPFVTSGIRLGTPAITTRGFNEKDMAVVAEAI-SLVVKDVDKNKEQAKAL 401
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BACSK (Serine hydroxymethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 70/151 (46.36%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 10 EGAVYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 459 E +F K++ ++FP +QGGP H + A AVA +A + FK YAKQ+ ANA LG L +G +V+GGT+NHL+L DLR L LTG EK D IT NKNA+ F G+RIGT A+TSRG E + ++IGE + A+TL Sbjct: 240 EETAEEFGKKLDKSIFPGIQGGPLMHVIAAKAVAFGEALSDEFKTYAKQIIANAKRLGEKLQAEGVDIVSGGTDNHLLLLDLRSLQLTGKVAEKALDAVGITTNKNAIPFDPEKPFVTSGIRIGTAAVTSRGFGENEMDEIGELI--ALTL 388
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA2_RALSO (Serine hydroxymethyltransferase 2 OS=Ralstonia solanacearum GN=glyA2 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 69/136 (50.74%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 KIN AVFP LQGGP H + AVA +A P FK Y V ANA ALG L G LVTGGT+NHL+L DLRP GL G +VE+ + IT NKN + F G+R+GTPA T+RG +FEQIG + Sbjct: 254 KINSAVFPGLQGGPLMHVIAGKAVAFGEALKPEFKTYIDSVLANAKALGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGTPAATTRGFGVAEFEQIGRLI 389
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 71/165 (43.03%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL------EIQKEYGKLLK 498 ++ +KI+ AVFP +QGGP H + A AV K+A TP FKAY + + NA L L +G +V+GGT+NHL+L D+RP GL G E + + NITVNKNA+ F G+R+GTPA+TSR L D + L RA+TL L E+++E +++K Sbjct: 245 EWANKIDKAVFPGIQGGPLMHVIAAKAVCFKEALTPEFKAYQQDIVNNAAILAKALMEQGLRVVSGGTDNHLMLVDVRPKGLNGRDAEAILESINITVNKNAIPFDPEKPTVTSGIRVGTPAVTSRALKGDDMRE----LARAITLVLDKHDSEEVKEEARRIVK 405 The following BLAST results are available for this feature:
BLAST of FC872848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872848 ID=FC872848; Name=FC872848; organism=Citrus clementina; type=EST; length=704bpback to top |