FC872865

Overview
NameFC872865
Unique NameFC872865
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872865 vs. ExPASy Swiss-Prot
Match: ADK_SCHCO (Adenosine kinase OS=Schizophyllum commune GN=ADK PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.786e-44
Identity = 97/266 (36.47%), Postives = 153/266 (57.52%), Query Frame = 2
Query:    2 GAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVV---AQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 787
            GA + L  P +  Y GC+G D   E++K  +K  G++  Y   +   TG CAV + G +RSLV  L AA  ++  HL       LV+  +++Y+ G+F+T    S   +A  +AA +K F++N +APFI +FF  A++++LPY+D +  NE+EA  ++   G     D+  +A  L+  PK +  R R  + T GA+  VV   A+ G+++ F V  L + ++VDTNGAGDAF GGFL  LV  + +++ V AG   + + IQ+ G
Sbjct:   69 GAAYCLP-PKSVVYTGCVGDDDLAEQLKAANKREGLDEAYLVKKGEKTGACAVIITGHDRSLVTTLRAAEKFEQSHLSSEAVAPLVDAVQFYYMEGYFVTHGLASALELAGKSAAKSKCFVLNFSAPFIPQFFMPAIQQLLPYVDIVIANESEAEAWASASGHPAPTDLAAVAKSLAMQPKTNPARPRVVIFTHGAEETVVVNSAEPGRVRTFKVDKLAEGEIVDTNGAGDAFAGGFLGALVAGRELDDSVEAGHKLAKISIQQIG 333          
BLAST of FC872865 vs. ExPASy Swiss-Prot
Match: ADK_TOXGO (Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.450e-32
Identity = 93/282 (32.98%), Postives = 143/282 (50.71%), Query Frame = 2
Query:    8 QWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWA-LVEKAKYFYIAGFFLTVSPDSIQLVAEHA-AANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI---------------RKRTAVITQGADPVVVAQ---DGKL--KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 787
            Q +L+ PG+  Y+G IG D  G+ +K+     G+   +      STG CAV +   ER+L  +L A   ++      PE+W      A  FY   + LT +P +   VA +A    N +F +NL+APF  E +KDA++ +L + + +FGNE E    +KV        E+ AL  +    A E+                 +  V+T+G +PV+ A+   DG +   +  V V+  +K+VDTNGAGDAFVGGFL  L Q K +++C+  G   +  +IQ  G
Sbjct:   79 QKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRL-----PEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA--AEKTALSTANKEHAVEVCTGALRLLTAGQNTGATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVG 353          
BLAST of FC872865 vs. ExPASy Swiss-Prot
Match: RBSK_HAEIN (Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 70/257 (27.24%), Postives = 117/257 (45.53%), Query Frame = 2
Query:   38 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAS-TGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR---TAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 787
            ++I CIG D  G+ MK      G++  +    S   TG   + V     + +   S AN + SE + + ++ A + ++    +    L      ++L A+ A  N    ++N A   I        +++L  +D I  NETEA   + V         E+A + S    AS    +   T +IT GA  V V++ GK   +K F V      + +DT  AGD F GGF++ L++EK  +E +R G  A+ + + + G
Sbjct:   57 AFISCIGSDSIGKTMKNAFAQEGIDTTHINTVSQEMTGMAFIQVAKSSENSIVLASGANSHLSEMVVR-QSEAQIAQSDCLLMQ---LETPLSGVELAAQIAKKNGVKVVLNPAPAQILS------DELLSLIDIITPNETEAEILTGV---------EVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRIIKGFCV------QAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKG 288          
BLAST of FC872865 vs. ExPASy Swiss-Prot
Match: RBSK_LACLA (Ribokinase OS=Lactococcus lactis subsp. lactis GN=rbsK PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 66/254 (25.98%), Postives = 105/254 (41.34%), Query Frame = 2
Query:   26 PGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 787
            P   S IG +GKD FGE + +N K   V          +TG   + +   +  ++    A N     +L   + W  +++++   +        P    L        N + ++   AP      K  LE ++ ++DYI  NE E +       +    +EEI  K S             ++T G++ V+      L+K P I   K K+VDT GAGD F G F   L +   I + +R    ASH+ IQ+ G
Sbjct:   53 PNEVSMIGAVGKDAFGESILQNFKENAVLFENVGTVPQTTGIAQITLYDDDNRIIIIPGANNEVLPSYLA--DLWEKIKESQLVILQNEI----PHETNLAIAKFCKENAIKVLYNPAPAR----KTDLE-MIDFVDYITPNEHECKEL-----FPNLALEEILKKYSN----------RLIVTLGSEGVIFHDGETLQKIPAI---KAKVVDTTGAGDTFNGAFAFGLTENLSISDSIRLAVVASHLSIQKFG 277          
The following BLAST results are available for this feature:
BLAST of FC872865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ADK_SCHCO2.786e-4436.47Adenosine kinase OS=Schizophyllum commune GN=ADK P... [more]
ADK_TOXGO5.450e-3232.98Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 S... [more]
RBSK_HAEIN9.666e-1327.24Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 ... [more]
RBSK_LACLA1.823e-1125.98Ribokinase OS=Lactococcus lactis subsp. lactis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DA05ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3DA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872865 ID=FC872865; Name=FC872865; organism=Citrus clementina; type=EST; length=861bp
GGGCGCGCAGTGGATGCTTCAAATTCCTGGTGCAACAAGCTACATTGGTT
GCATTGGAAAAGACAAGTTTGGTGAGGAGATGAAAAAAAACTCAAAACTC
GCTGGGGTTAATGTTCACTATTATGAGGATGAATCTGCATCAACAGGAAC
TTGTGCTGTCTGTGTTGTGGGTGGTGAAAGGTCACTAGTTGCAAATTTAT
CAGCAGCAAATTGCTACAAATCTGAGCATCTGAAGAAACCAGAAAATTGG
GCATTAGTTGAGAAGGCAAAGTACTTCTATATTGCTGGATTTTTTCTCAC
CGTATCTCCAGACTCCATACAACTAGTTGCTGAACATGCAGCTGCAAATA
ACAAGGTCTTCATGATGAACCTTGCTGCTCCATTTATCTGTGAGTTCTTC
AAGGATGCACTGGAGAAAGTTTTGCCGTATATGGATTACATCTTTGGAAA
TGAGACAGAAGCAAGAACCTTTTCAAAAGTCCAAGGCTGGGAGACTGATG
ATGTCGAGGAAATAGCTCTGAAGCTTTCCCAATGGCCCAAAGCATCAGAA
ATACGCAAGAGGACTGCTGTCATTACCCAGGGCGCAGATCCTGTAGTTGT
TGCTCAGGATGGGAAGCTGAAGAAGTTCCCTGTAATAGTATTACCTAAAG
ACAAACTTGTCGATACCAATGGAGCAGGAGATGCATTTGTTGGAGGATTT
CTGTCGCAGTTGGTTCAGGAGAAGCCCATTGAAGAATGTGTGAGAGCTGG
CTGTTACGCGTCACATGTTATTATCCAAAGATCTGGTTGCACATACCCAG
AGAAGCCCGAATTCAACTAAGAGATATCTCTTTCTGTCAGTCCCAGTTGG
TATCTTAAACT
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