FC872866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 7.443e-42 Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G A+GVDLL+NPDL+ATD +SFK+A+WFWMT Q KPS H+VI W PS + AGR PGYG+ TNI+NGG+ECG G +D V NRIGF+ +CG FGI G NLDCYNQRP+ Sbjct: 209 NFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 9.721e-42 Identity = 74/120 (61.67%), Postives = 92/120 (76.67%), Query Frame = 3 Query: 12 NYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 371 NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA + A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDCYNQR +G Sbjct: 132 NYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.166e-41 Identity = 74/122 (60.66%), Postives = 92/122 (75.41%), Query Frame = 3 Query: 3 GNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 G NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA + +A R PGYG+ TNIINGGIECG+G N V +RIGF+ +C + PGDNLDCY+QR + Sbjct: 123 GQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.828e-41 Identity = 74/130 (56.92%), Postives = 97/130 (74.62%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY + G+A+GVDL+NNPDL+ATD V+SFK+A WFWMT Q PKPSCH VI W PS + +AGRLPG+G+ TNIINGG+ECG+G V++RIGF+ +C + G+NLDC NQRP+G L+ ++ Sbjct: 185 NYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.694e-41 Identity = 74/121 (61.16%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS + AGR PG+G+ TNIINGG+ECG G + V +RIGF+ +C G+ GDNLDCYNQRP+ Sbjct: 145 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.825e-41 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 3 Query: 3 GNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 G NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA + AGR+PGYG+ TNIINGGIECG G NDA +RIG++ +C G G NLDCYNQR + Sbjct: 138 GQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.075e-40 Identity = 72/122 (59.02%), Postives = 90/122 (73.77%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 371 N NY G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS + GR+PG+G+ TNIINGG+EC G N + NRIGF+ +C G+ PG+NLDC NQRP+G Sbjct: 125 NYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.075e-40 Identity = 76/126 (60.32%), Postives = 90/126 (71.43%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNL 380 N NY CG+ L + LL P+L+ TDPV+SFK+AIWFWM Q PKPSCH VI W PSA ++ AGR+PGYG+ TNIINGGIECGQGG N A +RIGF+ +C G G NLDCY QRP+G L Sbjct: 208 NYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS + AGR+PG+G+ TNI+NGGIECG G + V +RIGF+ +C G+ G+NLDCY+QRP+ Sbjct: 197 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.084e-40 Identity = 73/121 (60.33%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G A+GVDLL NPDL+ATD + FK+AIWFWMTAQPPKPS H VI +W PS + AGR+PG+G+ TNIINGGIECG G + V +RIGF+ +C G+ G+NLDCY+QRP+ Sbjct: 145 NYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265 The following BLAST results are available for this feature:
BLAST of FC872866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872866 ID=FC872866; Name=FC872866; organism=Citrus clementina; type=EST; length=553bpback to top |