FC872866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.334e-40 Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS + AGR+PG+G+ TNI+NGGIECG G + V +RIGF+ +C + G+NLDCYNQRP+ Sbjct: 200 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 6.967e-40 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 3 Query: 12 NYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS + A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G+NLDC NQ+ + Sbjct: 130 NYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.188e-39 Identity = 68/121 (56.20%), Postives = 96/121 (79.34%), Query Frame = 3 Query: 12 NYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQG-GNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 371 NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS + ++GRLPGYG+ TNIINGG ECG+G D ++R+G++ +C F + GDN+ C +Q+PYG Sbjct: 134 NYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.027e-39 Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 12 NYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA + +A R PG G+ TNIINGGIECG G N AV +RIG++ +CG + PGDNLDCYNQR + Sbjct: 132 NYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.647e-39 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G+A+ DL+NNPDLL+T+P +SFK+AIWFWMT Q KPS H+VI W PSA + +AGR+PGYG+ TNIINGGIECG G ++ V +R+GF+ +C FG+ PG NLDC NQR + Sbjct: 199 NYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.516e-39 Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCG 314 N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII W+PSA + A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +CG Sbjct: 199 NYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.516e-39 Identity = 68/121 (56.20%), Postives = 89/121 (73.55%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G+A+G +LL+NPDL+A+D +SFK+A WFWMT Q PKPSCH V+ +W P+ + AGR+PGYG+ TNIINGG+ECG G + V +RIGF+ +C G+ G NLDCYNQRP+ Sbjct: 201 NYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.241e-38 Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 3 Query: 3 GNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 G NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA + +A R+PGYG+ TNIINGGIECG+G N V +RIG++ + PGDNLDCYNQR + Sbjct: 130 GQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNF 251
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 2.241e-38 Identity = 69/122 (56.56%), Postives = 88/122 (72.13%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 371 N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Q PKPSCH V +W PSA + AGR+PGYG+ TNIINGG+ECG G +D V +RIGF+ +C G+ NLDCY+QRP+G Sbjct: 204 NFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.993e-38 Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 3 Query: 12 NYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS + A R+PGYG+ TNIING ECG G N A +RIGF+ +CG + G+NLDC NQ+ + Sbjct: 130 NYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250 The following BLAST results are available for this feature:
BLAST of FC872866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872866 ID=FC872866; Name=FC872866; organism=Citrus clementina; type=EST; length=553bpback to top |