FC872866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 9.744e-34 Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G+A+GVDLL NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W PS+ + AGR+PGYG+ TNII+GG+ECG+G V +RIG++ DNLDCYNQ+P+ Sbjct: 90 NYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.400e-32 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQS 392 N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ + AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC+ Q P+ ++M+ S Sbjct: 210 NYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.135e-32 Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQS 392 N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ + AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC+ Q P+ +M+ S Sbjct: 210 NYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.191e-31 Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY G+ALG D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++P +V A R G+GL TNI+NGG+EC + G+ V NRIGF+ +C G+ G NLDC +Q+P+ Sbjct: 170 NFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.317e-30 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY CG LG +LL+ P+ +ATDPVLSF++A+WFWM PSCHEVI EW PS ++ AGR PG+G+ TNII G EC + G +NRI ++ +C + PGDNL C NQ + Sbjct: 183 NYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18 Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY G+A+G D L NP+ +ATD SFK+A+WFWMT + H V+ G+G TT ING +EC D +RI F+ +C FG+ PGDNL C Sbjct: 195 NYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT------NVHSVMNQ---------------GFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGND--AVR-NRIGFFTTFCGKFGIQPGDNL 344 N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH+++++ A R+P G+ NII+ G+D AVR + IGF+ +C G+ G +L Sbjct: 247 NFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN------ANSAANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.372e-16 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY+ G+ L D LN+PD++ DP++SFK+++WFW+ + VI+D P+ G+G T IINGG EC + R+G++ +C + G+ PG+NL C Sbjct: 153 NYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.015e-16 Identity = 42/115 (36.52%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY G+ +G D L +PD +A DP +SFK+A+WFWM + H+V+ L G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 195 NYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVM---------------LQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15 Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY G+++G D L +PD +A PVL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ FC +FG+ PG NL C Sbjct: 176 NFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271 The following BLAST results are available for this feature:
BLAST of FC872866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872866 ID=FC872866; Name=FC872866; organism=Citrus clementina; type=EST; length=553bpback to top |