FC872866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15 Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY G+ +G D L +PD +A DP +SFK+A+WFWM + H+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 192 NFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQ---------------GFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.482e-15 Identity = 38/115 (33.04%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC G + AV RI ++ +CG+ G+ PG NL C Sbjct: 176 NYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.256e-13 Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 350 N NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 176 NYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.146e-12 Identity = 37/115 (32.17%), Postives = 56/115 (48.70%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 350 N NY G A D L P+ ++ D V+SFK+A+W+WM P +I++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 177 NFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRP-------VINQ--------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 117 MTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIEC 254 MT Q KPSCH+VI + W+P+A + AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11 Identity = 38/116 (32.76%), Postives = 56/116 (48.28%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 350 N NY G +G + L +P+ +A D V++FK+A+WFWM V+ G+G T ING +EC G N A N R+G++ +C + + PG NL C Sbjct: 187 NYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN---------------------NVHGVMPQGFGATIRAINGALEC-NGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280 The following BLAST results are available for this feature:
BLAST of FC872866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872866 ID=FC872866; Name=FC872866; organism=Citrus clementina; type=EST; length=553bpback to top |