FC872870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.065e-12 Identity = 30/101 (29.70%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 317 R+ F+PEF+NR+D+ I+F+PL + I +I+ ++ R+ + +++++++ + Y+P YG RP+KR + + +EN LAK I+ G+ + +++ Sbjct: 751 RAHFKPEFLNRIDDTILFKPLALEDIKNIIVKMTSQLSHRLEEMDVQLELSEEVKVWIAENAYEPAYGARPLKRYLTKVIENPLAKLIIGGKIPPKSKVIV 851
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_STRMU (Chaperone protein clpB OS=Streptococcus mutans GN=clpB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12 Identity = 33/105 (31.43%), Postives = 65/105 (61.90%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE-FKDEDTIV 314 +D FRPEF+NR+DE ++F L ++ +V++ + +Q R+ ++ + + +T++ LL G+D +G RP++R I Q +EN LA +++ + K+++T V Sbjct: 742 LDELNHSFRPEFLNRIDETVLFNALSEKDMTGVVKVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLENPLALYLIQNQKNKEKETFV 846
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12 Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGIL-RGEFKDEDTIVIDTEV 329 FRPEF NR+D + F L + +S IV L L VQK +A + +K++VT AA L GYD G RP++RVI+Q + +++ L + K+ ++D E+ Sbjct: 656 FRPEFRNRLDNIVEFSHLTKQDLSQIVDLMLADVQKTLAKKSIKLEVTKAAKDWLMEQGYDEAMGARPLRRVIEQQIRDKVTDFYLDHLDVKNLKADLVDAEI 758
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPA_RHOBL (ClpA homolog protein OS=Rhodopseudomonas blastica PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11 Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 3 Query: 9 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 290 A F PEF NR+D I F PL R+ I +V + +++ ++ DR + +++T A LG GYD G RP+ RVIQ++++ LA+ +L G+ Sbjct: 661 AVERTFTPEFRNRLDAVISFAPLGREIILQVVEKFVLQLEAQLIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKKPLAEELLFGK 754
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: ADPR_RHOER (ATP-dependent protease ATP-binding subunit-like protein OS=Rhodococcus erythropolis PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11 Identity = 30/91 (32.97%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 9 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGIL 281 A F PEF NR+DE ++ D + RL+++ + R+A R + ++V D+A+ LL G+DP YG R ++R I+ + + +A +L Sbjct: 234 ALEKFFDPEFFNRIDETVILDEFDDQTAEQVTRLEIELITTRLARRGIDVEVDDSAVALLQRRGFDPVYGARGLRRTIRNVLADPVAGAVL 324 The following BLAST results are available for this feature:
BLAST of FC872870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872870 ID=FC872870; Name=FC872870; organism=Citrus clementina; type=EST; length=620bpback to top |