FC872870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.152e-21 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRG 287 FRPEF+NRVDE +VF PL +D I SI +QL+R+ R+ + ++V+D A++L+ +G+DP YG RP+KR IQQ +EN LAK IL G Sbjct: 749 FRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDKALELIAQVGFDPVYGARPLKRAIQQSIENPLAKSILAG 836
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.152e-21 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 FRPEF+NR+DE +VF PL R +S+I +QL R+ KR+ +R ++ +T A+++L G+DP YG RP+KR IQQ +EN LA+ IL G+ + +D E Sbjct: 749 FRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEAGFDPVYGARPLKRAIQQEIENPLAQKILSGQLLPGKPVTLDVE 849
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.423e-21 Identity = 47/106 (44.34%), Postives = 76/106 (71.70%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 + +A+ FRPEF+NR+D+ I+F L R +++ I ++QL RV+K +AD+K+ +++T AA+ L ++G+DP YG RP+KR IQ+ +EN LA +L F DTI++D Sbjct: 757 LQSAQKYFRPEFLNRIDDVILFHGLGRTELAQIAQIQLRRVEKLLADQKIHLRLTPAALDHLVAVGFDPVYGARPLKRAIQRELENPLAVKLLEEVFTPGDTILVD 862
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.423e-21 Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 + + R FRPEF+NR+D+ I+F L RD++ IV LQ+ R++K + ++K+ + ++DAA+ + S GYDP YG RP+KR IQ+ +EN +A IL F D I+ID Sbjct: 758 LQSLRKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIATKILENTFVAGDKILID 863
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_SHEON (Chaperone protein clpB OS=Shewanella oneidensis GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21 Identity = 42/89 (47.19%), Postives = 66/89 (74.16%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 290 FRPEF+NR+DE +VF PLD + I I +Q+ ++KR+A++ +++TD A+ L+ +G+DP YG RP+KR +QQ +EN LA+ +LRG+ Sbjct: 749 FRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEALSLIAEIGFDPVYGARPLKRALQQEMENPLAQKLLRGD 837
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21 Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 FRPE +NR+DE +VF LD+D I +I ++QL ++KR+ + +++ V+DAA+ ++ G+DP YG RP+KR IQ +EN LAK +L G + E I ++ + Sbjct: 752 FRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEAD 852
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21 Identity = 42/109 (38.53%), Postives = 78/109 (71.56%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEV 329 +DA + F+PEF+NR+D+ ++F PL ++Q++ IV +Q+ ++ +R+A R++ + V+D+A L GY+P YG RP++R+IQQ + ++LAK +L GE +D + +D ++ Sbjct: 731 MDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQIAQLAQRLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEVRDGSEVHVDADL 839
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21 Identity = 46/99 (46.46%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 27 RPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDT 323 RPEF+NR+DE I+F PL +I IV LQ+ VQK +A+ +++++TDAA+ L +GYDP +G RPVKR IQ+Y+ N+L+K +L E I++D+ Sbjct: 755 RPEFLNRIDETIMFLPLTETEIRQIVLLQIKGVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLSKKLLSQEVDRSKAIIVDS 853
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_DEIRA (Chaperone protein clpB OS=Deinococcus radiodurans GN=clpB PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.250e-21 Identity = 47/106 (44.34%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 +D R FRPEF+NRVD+ IVF L + SIV +QL +++R+A+R++ + +T+ A L LGYDP YG RP++R I QY+E LA+ IL G+ +D + +D Sbjct: 733 MDELRGEFRPEFLNRVDDIIVFDALTAKDLQSIVDIQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIETPLAREILGGQIQDGSVLNVD 838
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20 Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 FRPEF+NR+DE +VF PL ++ I I +QL R+ KR+ ++ TDA + +G +GYDP YG RP+KR IQQ +EN LA+ IL G+ + ID Sbjct: 747 FRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYDPVYGARPLKRAIQQEIENPLAQQILSGKLLPNQLVTID 845 The following BLAST results are available for this feature:
BLAST of FC872870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872870 ID=FC872870; Name=FC872870; organism=Citrus clementina; type=EST; length=620bpback to top |