FC872870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20 Identity = 42/103 (40.78%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVT 332 F+PEF+NR+DE +++ L +QI IV +Q++ +++R+ADR++ ++++D A + L GYDP YG RP+KR IQ+ +++ LA +L G+F++ DT+ +D V+ Sbjct: 754 FKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQDPLALALLEGKFQEGDTVRVDLSVS 856
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_TREDE (Chaperone protein clpB OS=Treponema denticola GN=clpB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20 Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 R FRPEF+NR+DE + F L+++ I IV +QL V +R+ R++ ++V+D A L +GYDP +G RP+KR IQ +EN+LA+ +L G+F + TI++D Sbjct: 747 RDNFRPEFLNRIDEILTFNRLEKEHIRKIVDIQLRSVAERLQARRLGLKVSDKAKDFLADIGYDPMFGARPLKRAIQAELENKLAREVLEGKFPEGSTILVD 848
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20 Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 341 FRPEF+NR+DE IVF L + + I ++QL+R+++R+ R++ + V + AI L LGYDP +G RP+KR IQ Y+EN LA+ +L G++ + TI I + T F+ Sbjct: 753 FRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDAINQLVELGYDPLFGARPLKRAIQNYIENPLAQALLAGQYLPQSTITIGFDGTNFT 858
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20 Identity = 43/106 (40.57%), Postives = 75/106 (70.75%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 +DA + F+PEF+NR+D+ ++F L +Q++SIV +Q+ ++ R+A R++ ++V+D+A L GYDP YG RP++R+IQQ + + LAK +L G +D D +++D Sbjct: 733 MDAVKMAFKPEFVNRLDDVVIFDRLSPEQLTSIVDIQIKQLTDRLAGRRLNLRVSDSAKAWLAERGYDPAYGARPLRRLIQQAIGDTLAKELLAGNVRDGDGVLVD 838
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.691e-20 Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 FRPE +NR+DE +VF LD+ I SI ++QL ++KR+ + +++ V+DAA+ ++ G+DP YG RP+KR IQ +EN LAK +L G + E I ++ + Sbjct: 752 FRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEAD 852
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.691e-20 Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 R FRPEF+NRVDE I+F+PL ++I IV + +Q R+ADR + +++TDAA + + G+DP YG RP+KR +Q+ VE +LA+ ++ G D +V+D E Sbjct: 754 RGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVE 857
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.590e-20 Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRLDTSSDASAADNQE 422 R+ FRPEF+NRVDE I+F L R+ + +IV +Q+ R+Q ++DRK+ +Q+ D A + L + GYDP YG RP+KRVIQ+ V++ LA+ IL G+ D + ++TA S+ +L FR + + A+ + ++ Sbjct: 746 RASFRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGDILDGSLV----KITAGSD------RLNFRPISGAFSAAEPERED 871
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.590e-20 Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRLDTSSDASAADNQE 422 R+ FRPEF+NRVDE I+F L R+ + +IV +Q+ R+Q ++DRK+ +Q+ D A + L + GYDP YG RP+KRVIQ+ V++ LA+ IL G+ D + ++TA S+ +L FR + + A+ + ++ Sbjct: 746 RASFRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGDILDGSLV----KITAGSD------RLNFRPISGAFSAAEPERED 871
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.590e-20 Identity = 47/105 (44.76%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 317 ++ RS FRPEF+NR+D+ I+F L RD++ +IV +QL R+ +ADRK+ +++ + A L + GYDP YG RP+KRVIQ+ V++ LA+ IL GE D + + Sbjct: 744 MERVRSHFRPEFLNRIDDIILFHRLRRDEMGAIVEIQLKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILGGEIPDGSRVKV 848
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.995e-20 Identity = 44/106 (41.51%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 +D + + PEF+NR+D+ IVF L + IV ++LD VQ+R+ DR++ + VT+AA + L GY P YG RP+ R+IQ+ + N +A I++GE K ++ +VID Sbjct: 676 MDVVQKYYPPEFLNRIDDQIVFNKLSEKNLEDIVNVRLDEVQQRLNDRRIILTVTEAARKWLAEKGYSPAYGARPLNRLIQKRILNTMAMKIIQGEIKSDENVVID 781 The following BLAST results are available for this feature:
BLAST of FC872870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872870 ID=FC872870; Name=FC872870; organism=Citrus clementina; type=EST; length=620bpback to top |