FC872870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.830e-20 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 6 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTI 311 +A R FRPEF+NR+DE ++F+ L QIS IV++QLD V +R+ +K+ + AI L GYDP YG RP+KRVIQ + N L+K I+ G+ K DTI Sbjct: 743 EALRERFRPEFLNRIDEIVMFKSLGEAQISGIVKVQLDLVAQRLRAKKIGIDFNQEAIDFLAKKGYDPIYGARPLKRVIQTELLNPLSKEIISGKVKAGDTI 844
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.023e-19 Identity = 44/104 (42.31%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 9 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 A RS F+PEF+NR+D+ I+F L+ ++ IV +QL ++QKR+A R++ ++V+ A Q L G+DP YG RP++R++QQ + ++LAK +L G+ D DT+ ++ Sbjct: 734 AVRSAFKPEFINRLDDVIIFHGLEPGELVQIVDIQLAQLQKRLAQRRLTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGQVHDGDTVPVN 837
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.023e-19 Identity = 45/104 (43.27%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 R FRPEF+NRVDE I+F+PL ++I IV + +Q R+ADR + +++T+AA + + G+DP YG RP+KR +Q+ VE +LA+ ++ G D +V+D E Sbjct: 754 RGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVE 857
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_MYCLE (Chaperone protein clpB OS=Mycobacterium leprae GN=clpB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.336e-19 Identity = 42/104 (40.38%), Postives = 77/104 (74.04%), Query Frame = 3 Query: 9 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 A RS+F+PEF+NR+D+ ++F L+ +++ IV +QL+++ KR+A R+++++V+ A + L G+DP YG RP++R++QQ + ++LAK +L GE D DT+ ++ Sbjct: 734 AVRSVFKPEFINRLDDVLIFDGLNPEELVRIVDIQLEQLGKRLAQRRLQLEVSLPAKRWLAQHGFDPVYGARPLRRLVQQAIGDQLAKMLLAGEVHDGDTLPVN 837
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.336e-19 Identity = 43/99 (43.43%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 FRPEF+NR+DE +VF PLD+ I +I +QL R+ +R+A+R ++ ++D A+ + G+D +G RP+KR IQQ +EN LA+ IL G+ + ++ID Sbjct: 748 FRPEFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSLFGARPLKRAIQQELENPLAQQILSGKLLPNNPVIID 846
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.336e-19 Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 R FRPEF+NRVDE I+F+PL ++I IV + +Q R+ADR + +++TDAA + + G+DP YG RP+KR +Q+ VE +LA+ ++ D +V+D E Sbjct: 754 RGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIASTITDNSHVVVDVE 857
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.278e-19 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 FRPEF+NR+DE ++F+ L R I I +QL V +R+ R +K++V DAA L GYD +G RP+KR IQ +EN LA+ IL G F+ TIV+D Sbjct: 767 FRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILSGRFRGGSTIVVD 865
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_PORGI (Chaperone protein clpB OS=Porphyromonas gingivalis GN=clpB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.278e-19 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 27 RPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 RPEF+NR+DE IVF PL +I IVRLQLD + +++AD + + T+A + GYDP +G RPVKRV+Q++V NEL+K +L ++ID Sbjct: 755 RPEFLNRIDETIVFTPLTEKEIYEIVRLQLDGIVRQLADNDVVLHYTEAVVTFAAREGYDPQFGARPVKRVLQRFVLNELSKALLADTVDSTRPVLID 852
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_RICPR (Chaperone protein clpB OS=Rickettsia prowazekii GN=clpB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.975e-19 Identity = 43/104 (41.35%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 R++F+PEF+NR+DE I+F L+R+ I IV++QL ++K + + + ++ ++A+ L GYDP++G RP+KR+IQ+ ++N LAK IL GE +T+ I E Sbjct: 745 RAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLGSLKKILLQQNIILEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGNTVKIRRE 848
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.975e-19 Identity = 42/108 (38.89%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 ++ +++F+PEF+NR+DE I+F L+R+ I IV++QL+ ++K + + + ++ ++A+ L GYDP++G RP+KR+IQ+ ++N LAK IL GE +T+ I E Sbjct: 741 MEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNILLEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGNTVKIARE 848 The following BLAST results are available for this feature:
BLAST of FC872870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872870 ID=FC872870; Name=FC872870; organism=Citrus clementina; type=EST; length=620bpback to top |