FC872870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.975e-19 Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFK 296 ++ FRPEF+NRVDE +VF PL ++ I I +Q++R+ R+ ++ ++ V ++A+ + G+DP YG RP+KR IQQY+EN LA+ IL G+ + Sbjct: 742 LEVVSQYFRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQESALDFVAKAGFDPVYGARPLKRAIQQYIENPLAQEILSGKLE 839
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.975e-19 Identity = 46/113 (40.71%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 341 ++ R FRPEF+NRVDE ++F+PL QI+ IV L L R++ R+A+RK+ +++ D A + YDP YG RP++R +Q +E LA+ ++ GE +D T+ +D A S Sbjct: 749 MEELRRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNIETPLARKLIAGELRDGTTVEVDVVDDALS 861
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 R FRPE +NR+DE +VF PL DQ+ + RLQ+ V R+A+R + + VTDAA+ + + YDP YG RP++R +++ V EL+K ++R E + T+ ID Sbjct: 748 RKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEIDENSTVYID 849
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE--VTAFSNGQLP 356 R+ FRPEF+NRVDE I+F L + ++ IV +Q R+ K + DRK+ + + AA L G+DP YG RP+KRVIQ+ V++ LA+ IL G KD D + I E V F NG+ P Sbjct: 747 RAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVAISAEGGVLTF-NGKPP 861
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: HS101_ORYSJ (Heat shock protein 101 OS=Oryza sativa subsp. japonica GN=HSP101 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19 Identity = 43/102 (42.16%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 15 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 R FRPE +NR+DE ++F PL +Q+ + RLQ+ V R+A+R + + VTDAA+ ++ SL YDP YG RP++R I++ V +L+K +++ E + T+ ID Sbjct: 749 RRHFRPELLNRLDEIVIFDPLSHEQLRKVARLQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEEIDENCTVYID 850
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_RICCN (Chaperone protein clpB OS=Rickettsia conorii GN=clpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19 Identity = 41/108 (37.96%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 ++ +++F+PEF+NR+DE I+F L+R+ I IV++QL+ ++K + + + ++ ++A+ L GYDP++G RP+KR+IQ+ ++N LAK IL GE T+ I+++ Sbjct: 741 MEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNIILEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGKTVKINSK 848
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19 Identity = 43/111 (38.74%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 9 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 341 A R+ F+PEF+NR+D+ ++F+ L+ +++ IV +QL ++ KR+A R++++QV+ A + L G+DP YG RP++R++QQ + ++LAK +L G+ D DT+ ++ A S Sbjct: 734 AVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSPDADS 844
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19 Identity = 43/111 (38.74%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 9 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 341 A R+ F+PEF+NR+D+ ++F+ L+ +++ IV +QL ++ KR+A R++++QV+ A + L G+DP YG RP++R++QQ + ++LAK +L G+ D DT+ ++ A S Sbjct: 734 AVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSPDADS 844
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.629e-19 Identity = 40/105 (38.10%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 317 ++ + FRPEF+NR+DE IVF L+++ + IV L + ++QKR+ ++ + + +TD AI+ + + G+DP YG RP++R IQ+ +E+ L++ +LRG + E + I Sbjct: 693 IEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIEKEQQVKI 797
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.629e-19 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 F+PEF+NRVD+ I+F+PL + I I+ + L V+ R+ +R + ++VTD A ++L GYDP YG RP+KR I +E E+AK I+ GE D +ID Sbjct: 757 FKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEIYDGSVALID 855 The following BLAST results are available for this feature:
BLAST of FC872870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872870 ID=FC872870; Name=FC872870; organism=Citrus clementina; type=EST; length=620bpback to top |