FC872875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 230 SPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 228 SPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25 Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH+VII W PS + AGR+PG+GL TNIINGG+ECGQG N V +RIGF+ +C G+ G+NLDCYNQR Y SM Sbjct: 233 SPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.892e-25 Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH+VII W PS+ + A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 240 SPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.471e-25 Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 245 KPS H+VII W PSA + A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDCYNQR +G Sbjct: 173 KPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.471e-25 Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 234 SPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 3.227e-25 Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 6 PKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 PKPSCH VI +W+PS + AGRLPGYG+ TNIINGG+ECG+G + V +RIGF+ +C FG+ PG NLDCYNQR + Sbjct: 248 PKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.214e-25 Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH+VI W PSA + A RLPGYG+ TNIINGG+ECG G + V++RIGF+ +C G+ PGDN+DC NQ+ + L+ ++M Sbjct: 246 SPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.504e-25 Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPS H+VI W PS + AGR PGYG+ TNI+NGG+ECG G +D V NRIGF+ +CG FGI G NLDCYNQRP+ Sbjct: 252 KPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 9.388e-25 Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH VII W PS+ + AGR GYG+ TNIINGG+ECG+G N V +RIGF+ +C G+ G+NLDCYNQ P+G + SM Sbjct: 214 SPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302 The following BLAST results are available for this feature:
BLAST of FC872875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872875 ID=FC872875; Name=FC872875; organism=Citrus clementina; type=EST; length=467bpback to top |