FC872875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.226e-24 Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 +PKPSCH VI+ +W+PS + AGR+PGYG+ TNIINGG+ECG+G + V +RIGF+ +C G+ PG NLDCYNQR + Sbjct: 232 SPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.567e-24 Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM*SS 278 +PKPS H+VI W PS+ +V A RLPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G+NLDCY+Q P+G +L+ + +S Sbjct: 236 SPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.085e-24 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM*SS 278 +PKPS H+VI W PS+ +V A RLPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G+NLDCY+Q P+G +L + +S Sbjct: 235 SPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 7.948e-24 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPSCH+VI +W PSA + +A R PGYG+ TNIINGGIECG+G N V +RIGF+ +C + PGDNLDCY+QR + Sbjct: 167 KPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.038e-23 Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 +PKPSCH V+ +W P+ + AGR+PGYG+ TNIINGG+ECG G + V +RIGF+ +C G+ G NLDCYNQRP+ Sbjct: 242 SPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.356e-23 Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 245 +PKPSCH V +W PSA + AGR+PGYG+ TNIINGG+ECG G +D V +RIGF+ +C G+ NLDCY+QRP+G Sbjct: 245 SPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.312e-23 Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPS H+VII W PSA + +A R PG G+ TNIINGGIECG G N AV +RIG++ +CG + PGDNLDCYNQR + Sbjct: 173 KPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.312e-23 Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPSCH+VI+ W PSA + AGR+PGYG+ TNIINGGIECG G NDA +RIG++ +C G G NLDCYNQR + Sbjct: 182 KPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.944e-23 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 269 +PKPSCH VI W PS + +AGRLPG+G+ TNIINGG+ECG+G V++RIGF+ +C + G+NLDC NQRP+G L+ ++ Sbjct: 226 SPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.151e-23 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 A KPS H+VI W PSA + +AGR+PGYG+ TNIINGGIECG G ++ V +R+GF+ +C FG+ PG NLDC NQR + Sbjct: 240 ANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319 The following BLAST results are available for this feature:
BLAST of FC872875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872875 ID=FC872875; Name=FC872875; organism=Citrus clementina; type=EST; length=467bpback to top |