FC872875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.151e-23 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 APKPS H VI +W PS + AGR PG+G+ TNIINGG+ECG G + V +RIGF+ +C G+ GDNLDCYNQRP+ Sbjct: 186 APKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.728e-23 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 3 Query: 6 PKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 245 PKPS H+VI W PS + GR+PG+G+ TNIINGG+EC G N + NRIGF+ +C G+ PG+NLDC NQRP+G Sbjct: 167 PKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.958e-22 Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPSCH+VI W PSA + +A R+PGYG+ TNIINGGIECG+G N V +RIG++ + PGDNLDCYNQR + Sbjct: 174 KPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNF 251
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 104.375 bits (259), Expect = 2.557e-22 Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 APKPS H VI +W PS + AGR+PG+G+ TNI+NGGIECG G + V +RIGF+ +C G+ G+NLDCY+QRP+ Sbjct: 238 APKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.361e-22 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPSCH VII +W PS + A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G+NLDC NQ+ + Sbjct: 173 KPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.696e-22 Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 APKPS H VI +W PS + AGR+PG+G+ TNI+NGGIECG G + V +RIGF+ +C + G+NLDCYNQRP+ Sbjct: 241 APKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.696e-22 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 6 PKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 PKPS H VI +W PS + AGR+PG+G+ TNIINGGIECG G + V +RIGF+ +C G+ G+NLDCY+QRP+ Sbjct: 187 PKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.715e-22 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 3 Query: 3 APKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQG-GNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 245 +PKPSCH+VI ++W PS + ++GRLPGYG+ TNIINGG ECG+G D ++R+G++ +C F + GDN+ C +Q+PYG Sbjct: 173 SPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.297e-21 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPSCH VII +W PS + A R+PGYG+ TNIING ECG G N A +RIGF+ +CG + G+NLDC NQ+ + Sbjct: 173 KPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of FC872875 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.551e-19 Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 9 KPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 242 KPSCH+V++ E++P +V A R G+GL TNI+NGG+EC + G+ V NRIGF+ +C G+ G NLDC +Q+P+ Sbjct: 213 KPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290 The following BLAST results are available for this feature:
BLAST of FC872875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872875 ID=FC872875; Name=FC872875; organism=Citrus clementina; type=EST; length=467bpback to top |