FC872876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.693e-60 Identity = 120/270 (44.44%), Postives = 170/270 (62.96%), Query Frame = 2 Query: 2 GGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLK-KGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQV 808 G + G LV+HP V K++ TGS TG R+ AAAA +K V++ELGGKSP+IVF+D DLD AV + G F++ GQ+CS +R+ V + I EFL+R+ + + I DPL+E ++GP+VS Q EKV+ +I K+EGAT++ GG P ++ +G++++PTV D+ M I REE+FGPV+ V F EDE I AN + +GL V + DL R RV +AG +WIN + P+GG K SGFGRE L++Y +K V Sbjct: 207 GDRDTGPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGNLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYIQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.211e-60 Identity = 120/270 (44.44%), Postives = 170/270 (62.96%), Query Frame = 2 Query: 2 GGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLK-KGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQV 808 G + G LV+HP V K++ TGS TG R+ AAAA +K V++ELGGKSP+IVF+D DLD AV + G F++ GQ+CS +R+ V + I EFL+R+ + + I DP++E ++GP+VS Q EKV+ +I K+EGAT++ GG P ++ +G++V+PTV D+ M I REE+FGPV+ V F EDE I AN + +GL V + DL R RV +AG +WIN + P+GG K SGFGRE L++Y +K V Sbjct: 207 GDRDTGPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGSLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPMDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDEMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.211e-60 Identity = 119/270 (44.07%), Postives = 171/270 (63.33%), Query Frame = 2 Query: 5 GPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVT 811 GP GA + SHP ++KIAFTGS G + AA+ +K V+LELGG++P IV D DLD AVE G F+ GQ C+A SR+ V E + EF+ R V++ K + DP + GP + Q++K+L+ I + K EGA + CGG+ E +G F++PTV +D+ +M+I +EE+FGPV + F +E I+ AN T YGL AAV +K+L++ +++ A ++G VW+NC ++QAP+GG K SG GRELGE+ L Y VK VT Sbjct: 237 GPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMED--RGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVT 504
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 2.888e-60 Identity = 124/279 (44.44%), Postives = 172/279 (61.65%), Query Frame = 2 Query: 5 GPEAGAPLVSHPHVDKIAFTGSNATGIRIM-AAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSDEPWG 838 G AGA L SH VDK+AFTGS G I+ AAA+ +K V+LELGGKSP IVFED D+D A+ W FG F+ +GQ C A SR+ V ESI +F+++ + + + DP GP VS Q+++++++I K GAT+ GG R KG+F+EPT+ +++ M+I +EE+FGPV + F T+++AI+L N + YGL AAV +K+L VS A +AG VW+N Q P+GG K SG GRELGE L NY K V+ + D +G Sbjct: 220 GKVAGAALSSHMDVDKVAFTGSTVVGRTILKAAASSNLKKVTLELGGKSPNIVFEDADIDNAISWVNFGIFFNHGQCCCAGSRVYVQESIYDKFVQKFKERAQKNVVGDPFAADTFQGPQVSKVQFDRIMEYIQAGKDAGATVETGGKRKGD--KGYFIEPTIFSNVTEDMKIVKEEIFGPVCSIAKFKTKEDAIKLGNASTYGLAAAVHTKNLNTAIEVSNALKAGTVWVNTYNTLHHQMPFGGYKESGIGRELGEDALANYTQTKTVSIRLGDALFG 496
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.872e-59 Identity = 128/270 (47.41%), Postives = 165/270 (61.11%), Query Frame = 2 Query: 5 GPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVT 811 GP GA + SH +DKIAFTGS G I AA +K V+LELGGKSP I+F D DLD AVE G F+ GQ C+A SR+ V ESI EF+ R V+ K + P + GP + QY K+L+ I + +EGA + CGG +KGFF+EPTV +++ M+I +EE+FGPV + F T DE IE AN++ +GL AAV + D+ + VS A QAG VWINC +Q+P+GG K SG GRE+GE GL Y VK VT Sbjct: 243 GPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLG--RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTVDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGESGLREYSEVKTVT 510
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: BETB1_RHIME (Betaine aldehyde dehydrogenase 1 OS=Rhizobium meliloti GN=betB1 PE=3 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.445e-59 Identity = 118/270 (43.70%), Postives = 166/270 (61.48%), Query Frame = 2 Query: 2 GGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLK-KGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQV 808 G G LV+HP V K++ TGS TG ++ AAA +K V++ELGGKSP+IVF+D DL+ A+ + G F++ GQ+CS +R+ V I FL R+ + + I I DPL+E +LGP+VS Q +KV +I K+EGA ++ GG P ++ +G +++PTV D+ M I REE+FGPV+CV F E E I AN T +GL A V + DL R RV+ +AG +WIN C + P+GG K SGFGRE L++Y +K V Sbjct: 207 GDRATGPLLVNHPDVAKVSLTGSVPTGKKVAGAAAAELKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVQRKIKEPFLARLKERTEAIVIGDPLDEATQLGPMVSAAQRDKVFSYIGKGKAEGARLVTGGGIPNNVSGEGTYIQPTVFADVTDGMTIAREEIFGPVMCVLDFDDEVEVIARANATEFGLSAGVFTADLTRAHRVADRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSVAALNHYTELKTV 476
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.193e-59 Identity = 131/276 (47.46%), Postives = 168/276 (60.87%), Query Frame = 2 Query: 5 GPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSDE 829 GP AGA + H VDK+AFTGS G I AA +K V+LELGGKSP IV D D+D AV+ F+ GQ C A SR V ESI EFLER V+ K K+ +P E + GP V Q+EK+L +I + EGA +LCGG R ++GFF++PTV ++ M+I REE+FGPV + F +E I+ AN+TRYGL AAV ++DL++ S+A QAG VW+N P+GG K SG GRELGE GL Y VK VT VS++ Sbjct: 244 GPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLLCGGER--FGERGFFIKPTVFGNVQDDMRIAREEIFGPVQPLFKFKKIEEVIQRANNTRYGLAAAVFTRDLDKALYFSQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVSEK 517
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.446e-59 Identity = 117/277 (42.24%), Postives = 170/277 (61.37%), Query Frame = 2 Query: 5 GPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGAR--PEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSD 826 G E G L HP ++K++FTG TG ++MA+A+ +K V++ELGGKSP+IVFED DLD+A + + F+++GQ+C+ +R+ V + + A F ++V+ + I++ DP +E GP+VS E VL +I+ K +GA +LCGG R KG +V PTV TD M I REE+FGPV+ + + TE+E I ANDT +GL A +++KDL R RV +AGI WIN ++ P GG K SG GRE G L+N+ +K V + D Sbjct: 209 GREVGTWLTEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFEDADLDRAADIAMMANFYSSGQVCTNGTRVFVPKHLQAAFEAKIVERVARIRVGDPQDENTNFGPLVSFAHMESVLGYIAKGKEQGARLLCGGDRLTDGDFAKGAYVAPTVFTDCTDEMTIVREEIFGPVMSILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQVELGD 485
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.446e-59 Identity = 129/276 (46.74%), Postives = 167/276 (60.51%), Query Frame = 2 Query: 5 GPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSDE 829 GP GA + SH +DKIAFTGS G I AA +K V+LELGGKSP I+F D DLD AVE G F+ GQ C+A SR+ V ESI EF+ + VK K + P + GP + QY K+L+ I + +EGA + CGG +KGFF+EPTV +++ M+I +EE+FGPV + F T DE IE AN++ +GL AAV + D+ + VS A QAG VWINC +Q+P+GG K SG GRE+GE GL Y VK VT + E Sbjct: 243 GPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRKSVKRAKRKIVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLG--RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTVTIKIPQE 515
BLAST of FC872876 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.213e-58 Identity = 117/272 (43.01%), Postives = 167/272 (61.40%), Query Frame = 2 Query: 2 GGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGAR--PEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELANDTRYGLGAAVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQV 808 G GA L HP + K++FTG TG ++M+ A A +K V++ELGGKSP+IVFED DLD+A + + F+++GQ+C+ +R+ VH S+ F +R+++ +K I++ P + GP+VS Q +KVL FI + K+EGA +L GG R H G +V PTV D M+I REE+FGPV+ + F +EDE I ANDT YGL A V++++L R R +AGI WIN ++ P GG K SG GRE G L++Y +K V Sbjct: 207 GDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVGKPTDAATNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFASGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478 The following BLAST results are available for this feature:
BLAST of FC872876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872876 ID=FC872876; Name=FC872876; organism=Citrus clementina; type=EST; length=882bpback to top |