FC872927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 234 LSKIACNRLQKELAEWQVNPPSGFKHKAT-DNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 +S A RL ++ Q +PPSG DN+ +W + G T + + T++L + F E+YP + PQV F+ HP+VY++G +CLDIL + WSP V Sbjct: 1 MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEM-FHPNVYASGELCLDILQNRWSPTYDV 102
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 3 Query: 183 QSRETSMSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKAT-DNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 Q + G ++ A + R+QKELAE ++PP DN+ W + G PG++Y + L + F YP + P+V F H ++ S G ICLDIL D+WSPA+T+ Sbjct: 35 QVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTI 153
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 3 Query: 183 QSRETSMSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKAT-DNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 Q + G ++ A + R+QKELAE ++PP DN+ W + G PG++Y + L + F YP + P+V F H ++ S G ICLDIL D+WSPA+T+ Sbjct: 35 QVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTI 153
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 3 Query: 243 IACNRLQKELAEWQVNPPSGFKHKAT-DNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 +A R+ +ELA+ +PPS D+L W + G + YA + L + FP YP + P+V F HP++ SNG ICLDIL D WSPA+T+ Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFT-TRIYHPNINSNGSICLDILRDQWSPALTI 99
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 213 STTTRKALSKIACNRLQKELAEWQVNPPSGFKHKAT-DNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 S + L + R+QKELA+ ++PP DN+ W + G PG++Y + L + F YP + P+V F H ++ S G ICLDIL D+WSPA+T+ Sbjct: 37 SMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTI 145
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 213 STTTRKALSKIACNRLQKELAEWQVNPPSGFKHKAT-DNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 S + L + R+QKELA+ ++PP DN+ W + G PG++Y + L + F YP + P+V F H ++ S G ICLDIL D+WSPA+T+ Sbjct: 37 SMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTI 145
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 234 LSKIACNRLQKELAEWQVNPPSGFKHKATDN-LQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 +S A RL ++ Q +PP+G ++N + W + G GT + + T++L +EF E YP + P V F+ HP+VY++G ICLDIL + WSP V Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGSICLDILQNRWSPTYDV 102
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 234 LSKIACNRLQKELAEWQVNPPSGFKHKATDN-LQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 +S A RL ++ Q +PP+G ++N + W + G GT + + T++L +EF E YP + P V F+ HP+VY++G ICLDIL + WSP V Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGSICLDILQNRWSPTYDV 102
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 234 LSKIACNRLQKELAEWQVNPPSGFKHKATDN-LQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTV 539 +S A RL ++ Q +PP+G TDN + W + G T + + T++L +EF E YP + P V F+ HP+VY++G ICLDIL + WSP V Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS-KVFHPNVYADGGICLDILQNRWSPTYDV 102
BLAST of FC872927 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 234 LSKIACNRLQKELAEWQVNPPSGF------KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPERYPMEAPQVIFLHPSPL-HPHVYSNGHICLDILYD--SWSPAMTV 539 +S + RLQ+E +W+ + P GF K + +LQ+W + G GT +A Y + VE+P YP + P+V F P+ HP+VY +G ICL IL + W PA+T+ Sbjct: 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKF--PAGFYHPNVYPSGTICLSILNEDQDWRPAITL 109 The following BLAST results are available for this feature:
BLAST of FC872927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872927 ID=FC872927; Name=FC872927; organism=Citrus clementina; type=EST; length=876bpback to top |