FC872942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872942 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.000e-18 Identity = 58/130 (44.62%), Postives = 78/130 (60.00%), Query Frame = 3 Query: 6 FVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVEKACR-RVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSGAHT 386 FV GCDAS+LLD + T E+ A PN F+ I+++ + K C VVSC+D+L +AA SV +SGGPS+ VPLGRRDS + A + LP P+ ++ L + + L D DLVALSG HT Sbjct: 84 FVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVALSGGHT 212
BLAST of FC872942 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.346e-12 Identity = 59/198 (29.80%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 156 VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLP--GPSNSLDELKSSFRNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKG----LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNL 731 +S AD+ +A+ ++ +GGP + GR D + LP GP + D L+ F +GL+DK ++VALSGAHT GRA+ D + GKP+ +T G A ++ VK FDN YF +++ ++ +L +D LF P A E + + AFFK++ + ++ NL Sbjct: 165 ISYADLFQLASATAIEEAGGPDIPMKYGRVDVVAPEQCPEEGRLPDAGPPSPADHLRDVFYRMGLDDK-EIVALSGAHTLGRAR--------PDRSGWGKPETKYTKT-----------GPGEAGGQSWTVKWL-KFDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYA--EKYAEDVAAFFKDYAEAHAKLSNL 339 The following BLAST results are available for this feature:
BLAST of FC872942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872942 ID=FC872942; Name=FC872942; organism=Citrus clementina; type=EST; length=938bpback to top |