FC872951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872951 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.141e-33 Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = 3 Query: 3 PLLAAGAIPLLKVEKICQKIDTSSLTIENXXXXXXXXXXXXXXXXXXXEVRSPSRIQVQFKEGTLQPPDIKSTVDLPGNLNIFGQNINLSPVQQTLSPLQEAVGSISRAVSGQPPLKVPIPGERTQSWLLITYLDEDFRISRGD-GGLFVLVKEGSPLL 476 PLL+ G +PL +VE+I Q ID+ + T++N EVRSP R+Q++F+EG + P + ++ LP N+ GQ I+LSP + LS +Q+ S+++ +S QPPLK I QSWLL TYLDED RISR D G +FV +KEGSPLL Sbjct: 163 PLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321
BLAST of FC872951 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.541e-33 Identity = 68/159 (42.77%), Postives = 101/159 (63.52%), Query Frame = 3 Query: 3 PLLAAGAIPLLKVEKICQKIDTSSLTIENXXXXXXXXXXXXXXXXXXXEVRSPSRIQVQFKEGTLQPPDIKSTVDLPGNLNIFGQNINLSPVQQTLSPLQEAVGSISRAVSGQPPLKVPIPGERTQSWLLITYLDEDFRISRGD-GGLFVLVKEGSPLL 476 PLL+ G +PL++VE+I Q ID+ S T++N EVRSP R+Q++F+EG + P + ++ LP N+ GQ I++SP + ++ +Q+ S+ +++S QPP+K PI QSWLL TYLD++ RI RGD G +FVL+KEGSPLL Sbjct: 166 PLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDDELRIPRGDAGSVFVLIKEGSPLL 324
BLAST of FC872951 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 3 PLLAAGAIPLLKVEKICQKIDTSSLTIENXXXXXXXXXXXXXXXXXXXEVRSPSRIQVQFKEGTLQPPDIKSTVDLPGNLNIFGQNINLSPVQQTLSPLQEAVGSISRAVSGQPPLKVPIPGERTQSWLLITYLDEDFRISRGDGG-LFVLVKEGSPLL 476 PLL+ +PL+KVE+I Q ID+ +LT++N EVRSP R+ ++F+EG + P + ++ +P N++ GQ I+ +P +S LQ+ ++++ +S QPP+K I R +SWLL TYLDED RISRGDGG +FVL+KEGS L Sbjct: 163 PLLSRN-LPLVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGGSVFVLLKEGSSFL 320 The following BLAST results are available for this feature:
BLAST of FC872951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872951 ID=FC872951; Name=FC872951; organism=Citrus clementina; type=EST; length=682bpback to top |