FC872958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_HELAN (Glutathione peroxidase 1 OS=Helianthus annuus GN=GPXHA-1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.684e-45 Identity = 80/118 (67.80%), Postives = 99/118 (83.90%), Query Frame = 2 Query: 275 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 ++K+LYDFTVKD G DV LS +KGKV+LIVNVAS+CGLT ++Y EL+ +Y KYK +GFEILAFPCNQFG QEPG+N EI +F CT+FK+EFPIFDK+DVNG N APVY+ LK+ +G Sbjct: 5 SKKTLYDFTVKDAKGNDVDLSVYKGKVVLIVNVASKCGLTNNSYDELNQIYLKYKEKGFEILAFPCNQFGQQEPGTNEEIVDFVCTKFKSEFPIFDKIDVNGENAAPVYEFLKTGFYG 122 HSP 2 Score: 26.5646 bits (57), Expect = 4.684e-45 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 627 GILGDLVKWNFEKFL 671 GILG ++WNF KFL Sbjct: 122 GILGGDIQWNFSKFL 136
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.035e-44 Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 2 Query: 296 FTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 F+ KD+ G+DV LSK+KGKVLLIVNVAS+CG T SNY EL+ LY+KYK QGFEILAFPCNQFGGQEPGSN EI+ FACTRFKAE+P+F KV+VNG P+Y+ LKS G Sbjct: 25 FSDKDVKGQDVELSKYKGKVLLIVNVASQCGFTNSNYPELTTLYQKYKDQGFEILAFPCNQFGGQEPGSNEEIQVFACTRFKAEYPVFSKVNVNGKEADPLYKFLKSSKGG 135 HSP 2 Score: 33.113 bits (74), Expect = 1.035e-44 Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 618 SAGGILGDLVKWNFEKFL 671 S GG LGD +KWNF KFL Sbjct: 132 SKGGFLGDSIKWNFTKFL 149
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX2_ARATH (Probable glutathione peroxidase 2 OS=Arabidopsis thaliana GN=GPX2 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.171e-44 Identity = 84/116 (72.41%), Postives = 98/116 (84.48%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 KS+YDFTVKDI G DV L ++KGK LL+VNVAS+CGLT +NY EL+ LYEKYK QG EILAFPCNQF GQEPG+N EI++ CTRFKAEFPIFDKVDVNG NTAP+Y+ LK++ G Sbjct: 7 KSIYDFTVKDIGGNDVSLDQYKGKTLLVVNVASKCGLTDANYKELNVLYEKYKEQGLEILAFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDKVDVNGKNTAPLYKYLKAEKGG 122
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.409e-44 Identity = 87/118 (73.73%), Postives = 96/118 (81.36%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWGNF 634 KS++DF VKD G DV LS +KGKVLLIVNVAS+CGLT SNY EL+ LYE+YK +G EILAFPCNQFG QEPG N +I EFACTRFKAEFPIFDKVDVNG N APVY+ LKS G F Sbjct: 10 KSIHDFIVKDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDVNGSNAAPVYKYLKSSKGGLF 127
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_ARATH (Probable glutathione peroxidase 3, mitochondrial OS=Arabidopsis thaliana GN=GPX3 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.064e-44 Identity = 86/135 (63.70%), Postives = 100/135 (74.07%), Query Frame = 2 Query: 230 FFVKRRSFGAHATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWGNF 634 F++ R + S+Y+ +VKDI+GKDV LSKF GKVLLIVNVAS+CGLT NY E++ LY KYKTQGFEILAFPCNQFG QEPGSN EIKE C FKAEFPIFDK++VNG NT P+Y LK + G F Sbjct: 29 FYLYRYPSSPSTVEQSSTSIYNISVKDIEGKDVSLSKFTGKVLLIVNVASKCGLTHGNYKEMNILYAKYKTQGFEILAFPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDKIEVNGKNTCPLYNFLKEQKGGLF 163
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.217e-42 Identity = 76/119 (63.87%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 263 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSK 619 +++ +EKS++ FTVKD GK+V LS ++GKVLL+VNVAS+CG T SNY++L+ LY KYK QGF +LAFPCNQF QEPG++ E +FACTRFKAE+P+F KV VNG N APVY+ LKSK Sbjct: 6 SSSVSEKSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKFLKSK 124 HSP 2 Score: 26.5646 bits (57), Expect = 1.217e-42 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3 Query: 633 LGDLVKWNFEKFLSG 677 LG +KWNF KFL G Sbjct: 129 LGSRIKWNFTKFLVG 143
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX8_ARATH (Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.458e-41 Identity = 69/118 (58.47%), Postives = 96/118 (81.36%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWGNF 634 +S+Y+ +++D G ++ LS++K KVLLIVNVAS+CG+T SNY+EL+ LY +YK +G EILAFPCNQFG +EPG+N +I +F CTRFK+EFPIF+K++VNG N +P+Y+ LK WG F Sbjct: 7 ESVYELSIEDAKGNNLALSQYKDKVLLIVNVASKCGMTNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEVNGENASPLYKFLKKGKWGIF 124 HSP 2 Score: 27.335 bits (59), Expect = 6.458e-41 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 627 GILGDLVKWNFEKFL 671 GI GD ++WNF KFL Sbjct: 122 GIFGDDIQWNFAKFL 136
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.290e-37 Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 263 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKS 616 + + E+S++ FTVKD GKD+ +S ++GKVLLIVNVAS+CG T +NY++L+ LY KYK Q FEILAFPCNQF QEPG++ E EFAC RFKAE+P+F KV VNG N AP+Y+ LK+ Sbjct: 4 SASVPERSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKA 121
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX2_CAEEL (Probable glutathione peroxidase R05H10.5 OS=Caenorhabditis elegans GN=R05H10.5 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.032e-34 Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 S++ TVK+ G+D PLS ++GKVL+IVNVAS+CGLT SNY++ L + YK G E+LAFPCNQFGGQEP +I F +FK E +F K+DVNG NTAP+Y+ LK + G Sbjct: 3 SVHGITVKNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVYKKDGLEVLAFPCNQFGGQEPSCEIDIAAFVADKFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGG 117 HSP 2 Score: 30.4166 bits (67), Expect = 1.032e-34 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 624 GGILGDLVKWNFEKFLSG 677 GG L D +KWNF KFL G Sbjct: 116 GGFLVDAIKWNFTKFLVG 133
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_CAEEL (Probable glutathione peroxidase F26E4.12 OS=Caenorhabditis elegans GN=F26E4.12 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.204e-33 Identity = 61/115 (53.04%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 S+YDF VK+ +G DV LS +KGKVL+IVNVAS+CGLT NY++L L + YK G E+LAFPCNQF GQEP +I+ F +FK E +F K+DVNG +P+++ LK++ G Sbjct: 3 SVYDFNVKNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVLAFPCNQFAGQEPSCEIDIQAFVADKFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGG 117 HSP 2 Score: 29.6462 bits (65), Expect = 3.204e-33 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 624 GGILGDLVKWNFEKFLSG 677 GG + D +KWNF KFL G Sbjct: 116 GGFMFDAIKWNFTKFLVG 133 The following BLAST results are available for this feature:
BLAST of FC872958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872958 ID=FC872958; Name=FC872958; organism=Citrus clementina; type=EST; length=678bpback to top |