FC872958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPO_LACLA (Glutathione peroxidase OS=Lactococcus lactis subsp. lactis GN=gpo PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.566e-28 Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 + YDF+ ++G+ V +S FKGKV+++VN AS+CG TP + L LYE YK QG EIL FPCNQF Q+ G N EI EF + FP+F K+ VNG P+YQ LK + G Sbjct: 2 NFYDFSAFKMNGETVSMSDFKGKVVIVVNTASKCGFTPQ-FEGLEKLYENYKDQGLEILGFPCNQFVNQDAGENSEINEFCQLNYGVTFPMFQKIKVNGKEAHPLYQFLKKEAKG 115 HSP 2 Score: 25.409 bits (54), Expect = 3.566e-28 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 621 AGGILGDLVKWNFEKFL 671 A G L +KWNF KFL Sbjct: 113 AKGALSGTIKWNFTKFL 129
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_PONPY (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Pongo pygmaeus GN=GPX4 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 7.818e-28 Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F +F K+ VNG + P+++ +K Sbjct: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 31.5722 bits (70), Expect = 7.818e-28 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P GILG+ +KWNF KFL Sbjct: 151 PKGKGILGNAIKWNFTKFL 169
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_HUMAN (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Homo sapiens GN=GPX4 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 7.818e-28 Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F +F K+ VNG + P+++ +K Sbjct: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 31.5722 bits (70), Expect = 7.818e-28 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P GILG+ +KWNF KFL Sbjct: 151 PKGKGILGNAIKWNFTKFL 169
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_CEBAP (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Cebus apella GN=GPX4 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.325e-27 Identity = 54/110 (49.09%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F +F K+ VNG + P+++ +K Sbjct: 40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 31.5722 bits (70), Expect = 1.325e-27 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P GILG+ +KWNF KFL Sbjct: 151 PKGKGILGNAIKWNFTKFL 169
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_CALJA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Callithrix jacchus GN=GPX4 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.725e-27 Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F +F K+ VNG + P+++ +K Sbjct: 39 RSMHEFSAKDIDGHTVNLDKYRGFVCIVTNVASQUGKTQVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 29.6462 bits (65), Expect = 1.725e-27 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P G LG+ +KWNF KFL Sbjct: 151 PKGKGTLGNAIKWNFTKFL 169
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_MACFU (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Macaca fuscata fuscata GN=GPX4 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.923e-27 Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN +IKEFA + +F +F K+ VNG + P+++ +K Sbjct: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGVRILAFPCNQFGKQEPGSNEKIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 31.5722 bits (70), Expect = 2.923e-27 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P GILG+ +KWNF KFL Sbjct: 151 PKGKGILGNAIKWNFTKFL 169
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPO_LACLM (Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.943e-27 Identity = 54/115 (46.96%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 + YDF+ ++G+ V +S +KGKV+++VN AS+CG TP + L LYE YK QG EIL FPCNQF Q+ G N EI EF + F +F K+ VNG P+YQ LK + G Sbjct: 2 NFYDFSAVKMNGETVSMSDYKGKVVIVVNTASKCGFTPQ-FEGLEKLYETYKDQGLEILGFPCNQFANQDAGENTEINEFCQLNYGVTFTMFQKIKVNGKEAHPLYQFLKKEAKG 115 HSP 2 Score: 25.409 bits (54), Expect = 2.943e-27 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 621 AGGILGDLVKWNFEKFL 671 A G L +KWNF KFL Sbjct: 113 AKGALSGTIKWNFTKFL 129
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX42_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 4.925e-27 Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F ++ K+ VNG + P+++ +K Sbjct: 95 RSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMK 204 HSP 2 Score: 30.4166 bits (67), Expect = 4.925e-27 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P G+LG+ +KWNF KFL Sbjct: 207 PKGRGMLGNAIKWNFTKFL 225
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 4.954e-27 Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGS+ EIKEFA + +F +F K+ VNG + P+++ +K Sbjct: 39 RSMHEFSAKDIDGHMVNLDKYRGYVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 30.4166 bits (67), Expect = 4.954e-27 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P G+LG+ +KWNF KFL Sbjct: 151 PKGRGMLGNAIKWNFTKFL 169
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX41_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Mus musculus GN=Gpx4 PE=1 SV=4) HSP 1 Score: 110.153 bits (274), Expect = 4.954e-27 Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLK 613 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F ++ K+ VNG + P+++ +K Sbjct: 39 RSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMK 148 HSP 2 Score: 30.4166 bits (67), Expect = 4.954e-27 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 615 PSAGGILGDLVKWNFEKFL 671 P G+LG+ +KWNF KFL Sbjct: 151 PKGRGMLGNAIKWNFTKFL 169 The following BLAST results are available for this feature:
BLAST of FC872958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872958 ID=FC872958; Name=FC872958; organism=Citrus clementina; type=EST; length=678bpback to top |