FC872958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_RAT (Glutathione peroxidase 3 OS=Rattus norvegicus GN=Gpx3 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 4.076e-18 Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ G IL FPCNQFG QEPG N EI R F F +F+K DVNG Y LK+ C Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLT-DQYLELNALQEELGPFGLVILGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 4.076e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX5_MACFA (Epididymal secretory glutathione peroxidase OS=Macaca fascicularis GN=GPX5 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.079e-18 Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++YD+ ++ + VP ++ GK +L VNVA+ CGLT + Y EL+ L E+ K G +L FPCNQFG QEPG N EI R F F +F+K DVNG V+ LK C Sbjct: 39 TIYDYEAIALNKNEYVPFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKHSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 4.079e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX8_TETNG (Probable glutathione peroxidase 8 OS=Tetraodon nigroviridis GN=gpx8 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 290 YDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLL 610 Y F VKD G+ V L K++GK L+VNVASR T SNY L L+ + F +LAFPC QFG E GS+ + + FA + FP F ++ + G P ++ L Sbjct: 49 YSFEVKDAKGRTVSLEKYRGKASLVVNVASRSEQTESNYRSLQELHRELGPSHFNVLAFPCAQFGETETGSSRDSEAFAKATYGVTFPFFSRIKIMGSEAEPAFRFL 155
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_PONPY (Glutathione peroxidase 3 OS=Pongo pygmaeus GN=GPX3 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 5.300e-18 Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ G IL FPCNQFG QEPG N EI R F F +F+K DVNG Y LK+ C Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 5.300e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_HYLLA (Glutathione peroxidase 3 OS=Hylobates lar GN=GPX3 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 5.300e-18 Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ G IL FPCNQFG QEPG N EI R F F +F+K DVNG Y LK+ C Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 5.300e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_HUMAN (Glutathione peroxidase 3 OS=Homo sapiens GN=GPX3 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 5.300e-18 Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ G IL FPCNQFG QEPG N EI R F F +F+K DVNG Y LK+ C Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 5.300e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX6_HUMAN (Glutathione peroxidase 6 OS=Homo sapiens GN=GPX6 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 5.304e-18 Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI---KEFAC--TRFKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ ++G++ + +F GK +L VNVA+ GL + Y EL+ L E+ K G +LAFPCNQFG QEPG+N EI ++ C + F F +F+K DVNG V+ LK+ C Sbjct: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 5.304e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX6_MOUSE (Glutathione peroxidase 6 OS=Mus musculus GN=Gpx6 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.897e-18 Identity = 51/119 (42.86%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG V ++ GK +L VNVAS CGLT + Y EL+ L E+ K +L FPCNQFG QEPG N EI R + F +F+K DVNG N V+ LK+ C Sbjct: 39 TVYEYGANTIDGGGFVNFQQYAGKHILFVNVASFCGLT-ATYPELNTLQEELKPFNVTVLGFPCNQFGKQEPGKNSEILLGLKYVRPGGGYVPNFQLFEKGDVNGDNEQKVFSFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 6.897e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_MOUSE (Glutathione peroxidase 1 OS=Mus musculus GN=Gpx1 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 6.916e-18 Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 257 AHATAATEKSLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKS 616 A +AA + ++Y F+ + + G + V L +GKVLLI NVAS G T +Y+E++ L ++ +G +L FPCNQFG QE G N EI R F+ F +F+K +VNG P++ L++ Sbjct: 4 ARLSAAAQSTVYAFSARPLTGGEPVSLGSLRGKVLLIENVASLUGTTIRDYTEMNDLQKRLGPRGLVVLGFPCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRN 129 HSP 2 Score: 23.483 bits (49), Expect = 6.916e-18 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 + WNFEKFL G Sbjct: 158 IAWNFEKFLVG 168
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_CEBAP (Glutathione peroxidase 3 OS=Cebus apella GN=GPX3 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 8.961e-18 Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG++ P ++ GK +L VNVAS GLT Y EL+ L E+ G ++L FPCNQFG QEPG N EI R F F +F+K DVNG Y LK+ C Sbjct: 39 TIYEYGALTIDGEEYTPFKQYIGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLDLLGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 8.961e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189 The following BLAST results are available for this feature:
BLAST of FC872958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872958 ID=FC872958; Name=FC872958; organism=Citrus clementina; type=EST; length=678bpback to top |