FC872967

Overview
NameFC872967
Unique NameFC872967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:309..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.246e-30
Identity = 58/105 (55.24%), Postives = 78/105 (74.29%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +L   +A+  D + W  PE F PERFI++ +DYKGTN+E  PFG+GRRICPG+N+G+ANVEL LA LLY F+W LP G++  +LD+T +FGV   +K DL LIP+
Sbjct:  378 VLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLIPS 482          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.456e-29
Identity = 54/99 (54.55%), Postives = 76/99 (76.77%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            WA+ R+P +W++PE+FIPERF++N +DYKG N+EF PFGSGRR+CPG+  G+A V L L  LLY F+W+LP GM+  ++D+   +G+VC +K  L LIP
Sbjct:  392 WAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLIP 490          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.902e-29
Identity = 56/115 (48.70%), Postives = 79/115 (68.70%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENP-------LDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            K++  AWA+ R P+ W +PE F PERF ++        +DY+G+ +E+ PFGSGRR+CPG  FG+A +EL +A+LLY+F+W LP GM+P ELDM    G    R+N L L+P+PY
Sbjct:  396 KVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVPSPY 510          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.902e-29
Identity = 56/108 (51.85%), Postives = 78/108 (72.22%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            K++   WA+ RDP+ W++ E F PERF +  +D+ G N+E+ PFG GRRICPG +FG+AN  LPLA+LL  F+W+LP GM+P +LD+T   G+    K+DL+LI TPY
Sbjct:  392 KVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKDDLYLIATPY 499          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.484e-29
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +I+   +A+ RDP LWENPE F PERF+++ +DY+G N+E  PFGSGRRICPGM  GIA VEL L  LLYFF+W LP G    ++D+  +  ++ G+K  L L+PT
Sbjct:  393 QIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLELVPT 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.236e-29
Identity = 53/99 (53.54%), Postives = 75/99 (75.76%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            WA+ R+P +W++PE+FIPERF++N +DYKG N+E  PFGSGRRICPG+  G+A + L L  LLY F+W+LP GM+  ++D+   +G+VC +K  L LIP
Sbjct:  392 WAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIP 490          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.233e-28
Identity = 55/106 (51.89%), Postives = 79/106 (74.53%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +IL  AW++ RDP  WE+P++F PERF E   D+ G ++EF PFG+G+RICPG++FG+ANVE+PLA+LLY F+W+LP GM   +L +    G+   RK ++FL+PT
Sbjct:  384 RILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLYVAGTPGLSGPRKKNVFLVPT 489          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.610e-28
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYNNIS 338
            ++L  +WA+ R P+ W++ E FIPERF +   D+KG+ +E+ PFG+GRR CPG  F +A +EL +A+LLY+F+W LP GMQP ++DM    G    RKN L L+ +PY  IS
Sbjct:  388 RVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVASPYKPIS 499          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.746e-28
Identity = 53/99 (53.54%), Postives = 75/99 (75.76%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            WA+ R+P +W++PE+FIPERF+++ +DYKG N+E  PFGSGRRICPG+  G+A V L L  LLY F+W+LP GM+  ++D+   +G+VC +K  L LIP
Sbjct:  392 WAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIP 490          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.363e-27
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +IL  AWA+ RDP+LW +PE F PERFI++P+DY+G ++E  PFGSGRRICPGM  G+A +EL L  LLYFF+W+LP GM   ++D      +   +K  L L+P
Sbjct:  394 RILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVKKVHLKLVP 498          
The following BLAST results are available for this feature:
BLAST of FC872967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71DB_LOTJA2.246e-3055.24Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BB_ARATH1.456e-2954.55Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.902e-2948.70Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71D6_SOLCH1.902e-2951.85Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BN_ARATH2.484e-2952.83Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH4.236e-2953.54Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR1.233e-2851.89Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C99A3_ORYSJ1.610e-2848.21Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71BC_ARATH2.746e-2853.54Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH1.363e-2752.38Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DH10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872967 ID=FC872967; Name=FC872967; organism=Citrus clementina; type=EST; length=553bp
CCAAAATACTTTTCTATGCTTGGGCAGTAACAAGAGATCCCCAACTTTGG
GAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCCTTGGA
TTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAGAAGGA
TTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCATTGGCT
AAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAACCACA
TGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAAGAATG
ACTTGTTTCTGATTCCTACTCCTTACAATAATATTTCGTGAGGGATGCAA
TGACTTTGTTGTAAGATAAATTGTGCGGCCACATGATACCAATTTATGAT
ATAATGGGTGTAATAAATACAAAAGAAAATGGATCAATCAAAATCCTGTT
TGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAATAAAAAAAAAA
AAA
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