FC872967

Overview
NameFC872967
Unique NameFC872967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:309..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.363e-27
Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            WAV R+P +W++PE FIPERF+ + +DYKG ++E  PFGSGRR+CPGM  G+A V L L  LLY F+W+LP GM   ++D+   +G+VC +K  L LIP
Sbjct:  392 WAVQRNPNVWKDPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPLQLIP 490          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.780e-27
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            +++ RDP  WENP  F PERFI++P++YKG +YE  PFG+GRRICPGM  GI  VEL L  +LYFF+W LP GM+  ++DM      V  +K  L LIPTP+
Sbjct:  397 YSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLELIPTPH 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.325e-27
Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYNNIS 338
            ++L   WA+ RDP +WENP  F PERF+   +D KG +YE TPFG GRRICPG+   +  V L LA LLY F+W+LP G+   +LDM   FG+   R N L+ IP     I+
Sbjct:  400 QVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPVKKQTIN 511          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.325e-27
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 3
Query:    9 LFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYN 329
            L   WA+ RDP  WENPE F PERF+ N +D KG  +E  PFGSGRR CPG +F IA +EL LA+L++ FN+ LP G +P +LDMT   G+   RK+ L ++ TP++
Sbjct:  400 LINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVVATPFS 506          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 3
Query:    3 KILFYA--WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            K L Y   WA+ RDP  W++ + F PERF++N +D KG N+E  PFGSGRRICPGM  G   VE  LA +LY F+W++P GM   ++DM    G+  G+KN+L L+P  Y
Sbjct:  388 KTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKNELLLVPVKY 497          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.833e-27
Identity = 56/105 (53.33%), Postives = 69/105 (65.71%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +IL   WA+ RDP LW NPE F PERFI NP+DY+G ++E  PFGSGRRICPGM  GI  VEL L  LLYFF+W+ P GM   ++D      +   +K  L L+P
Sbjct:  394 RILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEEAGILTVVKKVPLKLVP 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.154e-26
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYNNI 335
            W + RDP  W++PE F+PERF+ + +D KG N+E  PFGSGRR+CP M  G   VE  LA LLY F+W+LP GM   ++DM    G+   +KN+L L+P  Y N+
Sbjct:  396 WGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGLNASKKNELVLVPRKYLNL 500          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.507e-26
Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            WAV   P +W++PE+F PERFI+N  D+KG N+E  PFGSGRR+CPGM  G+A V L L  LLY F+W+LP GM+  EL +   +G++C +K  L  IP
Sbjct:  392 WAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIP 490          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.570e-26
Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYNNIS 338
            +++  AWA+ RDP  W  PE F P+RF+E+ +D+KG ++E+ PFG GRRICPG+ F +AN+ELPLA+LL+ F+WQ        +L+M    GV   R++DL+L P  +++ S
Sbjct:  386 RVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ----SNTEKLNMKESRGVTVRREDDLYLTPVNFSSSS 493          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.384e-26
Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            +++  +WA+ R P+ W++ E F PERF +   DYKG+ +E+ PFG+GRR CPG  FG+  +EL +A+LLY+F+W LP GMQP ++DM         RKN L L+ +PY
Sbjct:  418 RVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDMDFVVTATTRRKNHLQLVASPY 525          
The following BLAST results are available for this feature:
BLAST of FC872967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71BE_ARATH1.363e-2753.54Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.780e-2753.92Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C76C4_ARATH2.325e-2748.21Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME2.325e-2751.40Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71B9_ARATH5.179e-2749.09Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BG_ARATH8.833e-2753.33Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH1.154e-2648.57Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.507e-2652.53Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71DC_CATRO2.570e-2645.54Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C99A2_ORYSJ4.384e-2646.30Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DH10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872967 ID=FC872967; Name=FC872967; organism=Citrus clementina; type=EST; length=553bp
CCAAAATACTTTTCTATGCTTGGGCAGTAACAAGAGATCCCCAACTTTGG
GAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCCTTGGA
TTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAGAAGGA
TTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCATTGGCT
AAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAACCACA
TGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAAGAATG
ACTTGTTTCTGATTCCTACTCCTTACAATAATATTTCGTGAGGGATGCAA
TGACTTTGTTGTAAGATAAATTGTGCGGCCACATGATACCAATTTATGAT
ATAATGGGTGTAATAAATACAAAAGAAAATGGATCAATCAAAATCCTGTT
TGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAATAAAAAAAAAA
AAA
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