FC872967

Overview
NameFC872967
Unique NameFC872967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:309..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.842e-25
Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +L  AW++ R+P+LWENPE F PERFI+ P+DYKG ++E  PFGSGR+ICPG+ FGIA VEL L  LLY+F+W+L    +  ++DM         +K  L L+P
Sbjct:  396 LLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRL--AEEDKDIDMEEAGDATIVKKVPLELVP 497          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.711e-25
Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            WA+ RDP  W++PE F+PERF ++ +D KG N+E   FGSGRRICPG+  G   VE  LA +LY F+W+LP GM   ++DM    G+   +K++L L+P  Y
Sbjct:  396 WAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVEDIDMEEAPGLTVSKKSELVLVPVKY 497          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.847e-25
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPL-DYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +++  A+A+ RDP  W +P++F P RF+E  + D+KG+N+EF PFGSGRR CPGM  G+  ++L +A +L+ F W+LP GM+P ELDM   FG+   +   LF +PT
Sbjct:  407 RVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVPT 513          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.330e-25
Identity = 46/105 (43.81%), Postives = 71/105 (67.62%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +++   +++ RDP+LW NP+ F P+RF+++ +DY+G N+E  PFGSGRRICPGM  GI  VEL L  LLYFF+W +P G    ++++     ++  +K  L L+P
Sbjct:  396 QMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVP 500          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.268e-25
Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            WA+ RDP  W++PE F+PERF++N +D KG ++E  PFG GRRICP +  G   VE  LA LLY F+W+LP G++  ++D+    G+   +KN+L L+P
Sbjct:  395 WAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVP 493          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.268e-25
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +IL    A+ RDP+LW NP+ F PERF+++ +DY+G +YE  PFGSGRRICPGM  GIA VEL L  LLYFF+W+LP GM   ++D      +   +K  L L+P
Sbjct:  394 RILVNVSAIGRDPKLWTNPKEFDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLKLVP 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +L   W++ RDP+ W+NPE F PERFI+ P+DYKG ++E  PFGSGRRICPG+ F IA VEL L  LLY F+W+LP   +  +LDM     V   +K  L L+P
Sbjct:  393 LLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPE--EDKDLDMEEAGDVTIIKKVPLKLVP 494          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.410e-24
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            ++L  A ++  DP  WENP  F+PERF+ +P+D+KG ++E  PFG GRR CPG+NF +  VEL LA LL+ F+W+LP G+   +LDM    G+   +K  L+L  TP+
Sbjct:  390 RVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHKKAHLWLKATPF 497          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24
Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +A+ RDP  W NP  FIPERF+++P+DYKG ++E  PFG GRRICPGM  G+  VEL L  +LYFF+W LP GM   +++M      V  +K  L L+P
Sbjct:  397 YAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPLELVP 495          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 3
Query:   18 AWAVTRDPQLW-ENPESFIPERFIENP--LDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            AWAV+RD   W +NP  FIPERF+     +D+KG ++E  PFGSGRR+CP M+ GIA VE+P A LLY F+W LP G++P ++ M    G+   +K  L L PT +
Sbjct:  393 AWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498          
The following BLAST results are available for this feature:
BLAST of FC872967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71B3_ARATH2.842e-2550.96Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BQ_ARATH3.711e-2548.04Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH4.847e-2546.73Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH6.330e-2543.81Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BW_ARATH8.268e-2547.47Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH8.268e-2551.43Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH1.080e-2451.92Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN1.410e-2446.30Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BL_ARATH1.842e-2450.51Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH3.142e-2449.06Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DH10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872967 ID=FC872967; Name=FC872967; organism=Citrus clementina; type=EST; length=553bp
CCAAAATACTTTTCTATGCTTGGGCAGTAACAAGAGATCCCCAACTTTGG
GAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCCTTGGA
TTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAGAAGGA
TTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCATTGGCT
AAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAACCACA
TGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAAGAATG
ACTTGTTTCTGATTCCTACTCCTTACAATAATATTTCGTGAGGGATGCAA
TGACTTTGTTGTAAGATAAATTGTGCGGCCACATGATACCAATTTATGAT
ATAATGGGTGTAATAAATACAAAAGAAAATGGATCAATCAAAATCCTGTT
TGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAATAAAAAAAAAA
AAA
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