FC872967

Overview
NameFC872967
Unique NameFC872967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:309..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            ++    WA+ RDP +WEN   F PERF+   +D +G +YE TPFG+GRRICPG+   +  V L LA LLY F+W+LP G+   +LDM   FG+   + N L  +P
Sbjct:  401 QVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVP 505          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24
Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +L  AW++ RDP+ W+NPE F PERFI+ P+DYKG ++E  PFGSGRRICPG+   IA +EL L  LLYFF+W +P   +  ++DM     +   +K  L L+P
Sbjct:  397 LLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPE--KKKDMDMEEAGDLTVDKKVPLELLP 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.103e-24
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYNN 332
            ++   AWA+ RDP  W  P+ F P+RF+ + +DY G+++E  PFG+GRRICPG+  G  NV   LA LLY ++W LP  M+P ++ M     +   RK  L ++PT Y N
Sbjct:  418 RVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVPTKYKN 527          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.141e-24
Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHEL 257
            +I+  A+A+ RDP+LW NP+ F P+RF+++ +DY+G N+E  PFGSGRRICPGM  GIA VEL L  LLYFF+W LP   +  E+
Sbjct:  390 QIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKEEAKEI 474          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.559e-23
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLD----YKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQP--HELDMTAKFGVVCGRKNDLFLIP 317
            ++L   WA+ RDP +WE PE F+PERF+ +  D    Y G ++ + PFGSGRRICPG NFG+A +E+ LA L+Y F+W++P   +    ++ M  KFG++  R   L+L+P
Sbjct:  421 RVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRRNELLYLVP 531          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.559e-23
Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 326
            ++L   WA+ RD  +WE  E+F+PERF+E  +DY+G ++E  PFGSGRR CPG  F  A  EL LA L++ F+++LP G++  +LDM+   G    +K  L ++PTP+
Sbjct:  400 RVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVPTPH 507          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.559e-23
Identity = 43/77 (55.84%), Postives = 61/77 (79.22%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLP 233
            ++   AWA+ RDP+ WEN E F+PERF+ N +D+KG +++  PFG+GRR CPG+ FGI++VE+ LA LLY+FNW+LP
Sbjct:  393 RVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.036e-23
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +A+ RDP+ W NPE F PERF    ++YKG +YE  PFG+GRR CPGM  GI  +EL L  +LY+F+W LP GM   ++DM     +   +K  L LIPT
Sbjct:  399 YAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELIPT 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.660e-23
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENP----LDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            ++L +AWA+ RD   WE PE F+PERF++ P    +  KG +  F PFGSGRRICPGMNFG A +E+ LA L+Y F+W++P       + M   FG+   RK  L L+P
Sbjct:  426 RVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPG--SGAGVSMEESFGLTLRRKEKLLLVP 532          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.474e-23
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +A+ RDP+ W NPE F PERF+   ++YKG +YE  PFG+GRR CPGM  GI  +EL L  +LY+F+W LP GM   ++DM     +   +K  L L+PT
Sbjct:  397 YAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPT 496          
The following BLAST results are available for this feature:
BLAST of FC872967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C76C2_ARATH3.142e-2445.71Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71B4_ARATH3.142e-2449.04Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71E1_SORBI4.103e-2442.734-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BS_ARATH9.141e-2455.29Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE1.559e-2344.14Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71A6_NEPRA1.559e-2344.44Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71A1_PERAE1.559e-2355.84Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71B8_ARATH2.036e-2349.00Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE2.660e-2346.79Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71BU_ARATH3.474e-2348.00Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DH10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872967 ID=FC872967; Name=FC872967; organism=Citrus clementina; type=EST; length=553bp
CCAAAATACTTTTCTATGCTTGGGCAGTAACAAGAGATCCCCAACTTTGG
GAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCCTTGGA
TTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAGAAGGA
TTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCATTGGCT
AAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAACCACA
TGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAAGAATG
ACTTGTTTCTGATTCCTACTCCTTACAATAATATTTCGTGAGGGATGCAA
TGACTTTGTTGTAAGATAAATTGTGCGGCCACATGATACCAATTTATGAT
ATAATGGGTGTAATAAATACAAAAGAAAATGGATCAATCAAAATCCTGTT
TGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAATAAAAAAAAAA
AAA
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