FC872967

Overview
NameFC872967
Unique NameFC872967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:309..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 7.738e-23
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +I    W + RDP+ W +PE F PERF  + +D++G +++  PFGSGRRICPGM   IA+VEL L  LLY+F+W +P G +  ++DM     +   +K  L L+P
Sbjct:  394 QIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVP 498          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.320e-22
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLP 233
            +I+   +A+ RDP+LW NP+ F P+RF+++ +DYKG N+E  PFGSGRRICPGM  GI  VE  L  LLYFF+W LP
Sbjct:  390 QIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP 466          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.016e-22
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            ++L  AWA+ RDP+ W+NP  F PERF+E+ +D KG NYE  PFG+GRR+C G+  G   +      LL+ F+W+LP  + P  ++M    G+   +K  L +IP
Sbjct:  360 QVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 8.556e-22
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPYNNIS 338
            +++   WA+ RD  +WENP  F PERF+    D KG ++E  PFGSGRR+CPG++  +  + + LA LLY F+W+L  G+ P  +DM+  FG+   +   L  +P     IS
Sbjct:  401 QVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPVKKPTIS 512          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.906e-21
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHEL 257
            +IL   +A+ RDP+LWEN + F P+RF+++ +D+KG NYEF PFGSGRRICPGM  G   VE+ L  LLYFF+W L    +  E+
Sbjct:  390 QILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLAKQEEAKEI 474          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.251e-21
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIEN----PLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQ--PHELDMTAKFGVVCGRKNDLFLIP 317
            +++  AWA+ RDP  W+  E F PERF+E      +D  G +  F PFG+GRRIC G  F IA VE+ LA L+Y F+W++P  M+    ++DM+ +FG+   R   L+L+P
Sbjct:  416 RVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVP 526          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.246e-21
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPL----DYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            +++  AWA+ R    WE    F+PERF+   +    D K   ++F  FGSGRR+CPG++   A +E  L+ L+Y F+WQLP GM+  ++DMT  FG+   RK  L L+P
Sbjct:  427 RVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVP 535          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.460e-21
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            ++L  AWA+ RDP+ W++P SF PERF+ + +D KG +Y   PFG+GRR+C G+  G   +   L  LL  F W+LP G+ P  ++M    GV   +++ L +IP
Sbjct:  398 QVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.614e-20
Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFI---ENP-LDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTP 323
            +L   WA+ RDP  W +P  F PERF+   E P +D +G ++E  PFG+GRRIC GMN GI  V+L +A L++ FNW L  G  P  L+M   +G+   R + L + P P
Sbjct:  394 LLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHPRP 503          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.614e-20
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTP 323
            WAV RDP +W+NP  F PERF+E  +D KG ++   PFG+GRR+CPG   GI  V   ++ LL+ F W  P G +P E+DM+   G+V   +  +  + TP
Sbjct:  394 WAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATP 494          
The following BLAST results are available for this feature:
BLAST of FC872967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71B2_ARATH7.738e-2343.81Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71BT_ARATH1.320e-2257.14Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C76A1_SOLME5.016e-2241.90Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76C3_ARATH8.556e-2240.18Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71BF_ARATH1.906e-2152.94Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE3.251e-2142.34Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71C4_MAIZE4.246e-2141.28Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C76A2_SOLME9.460e-2140.95Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
F3PH_PETHY1.614e-2043.64Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C98A3_ARATH1.614e-2043.56Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DH10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872967 ID=FC872967; Name=FC872967; organism=Citrus clementina; type=EST; length=553bp
CCAAAATACTTTTCTATGCTTGGGCAGTAACAAGAGATCCCCAACTTTGG
GAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCCTTGGA
TTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAGAAGGA
TTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCATTGGCT
AAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAACCACA
TGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAAGAATG
ACTTGTTTCTGATTCCTACTCCTTACAATAATATTTCGTGAGGGATGCAA
TGACTTTGTTGTAAGATAAATTGTGCGGCCACATGATACCAATTTATGAT
ATAATGGGTGTAATAAATACAAAAGAAAATGGATCAATCAAAATCCTGTT
TGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAATAAAAAAAAAA
AAA
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