FC872967

Overview
NameFC872967
Unique NameFC872967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:309..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.614e-20
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            ++  AWA+ RDP  W+ PE F PERF+ + +D+KG ++E  PFG+GRR CPG  F +A +E  LA L+  F+W+LP   +  ELDM+ + GV   R   L  I T
Sbjct:  398 VMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELP--HECRELDMSERPGVAIRRVIPLLAIGT 500          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.107e-20
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWE-NPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +++  AWA+ RD   W  + E F PER +++PLD++GTN+E+ PFGSGRRICPG+ F +A VE+ LA L+  FNW++   +   E D+    G+   RK  L + P+
Sbjct:  388 QVITNAWAIQRDIVTWGIDAEEFRPERHLDSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPLIVFPS 494          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:   18 AWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            AWA+ R+P +W++P+ FIPERF+++ ++ KGT++E  PFGSGRR CP M  G++ VE  LA LLY F+W+        E+ +    G+   RK+ L L+P
Sbjct:  401 AWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWK-----ATEEVSVEEAPGLTSHRKHPLHLVP 495          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLW-ENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            ++L  AW++ RDP +W  + E F PER +++ LDY G + ++ PFGSGRRICPG+N  +  VE+ LA L+  F+W + PG    + D+   FG+   RKN L   P+
Sbjct:  388 EVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPLIAFPS 494          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWE-NPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTP 323
            +++  AWA+ RD   W  + E F PER +++ +D++GTN+EF PFGSGRRICPG+ F +A VE+ LA L+  FNW++       E D+    G+   RK  L + P+P
Sbjct:  389 QVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFPSP 496          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.008e-20
Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 3
Query:   21 WAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTP 323
            WAV RDP +W++P  F PERF+E  +D KG ++   PFGSGRR+CPG   GI      L  LL+ F W  P GM+P E+DM    G+V   +  +  + +P
Sbjct:  395 WAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAVVSP 495          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.008e-20
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 3
Query:    6 ILFYAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVV 284
            ++   WAV RDP++W NP  + PERF+E  +D KG+++   PFG+GRR+CPG   GI  V   +  LL+ F W LP G +P +++M    G+V
Sbjct:  392 VMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLV 484          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.366e-19
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLWENPESFIPERFIENP---LDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTP 323
            +++   WA+ RDP++WENP  F PERF+      +D +G ++E  PFG+GRRIC G   G A+VE  L  L++ F+W+LP G+   E++M   FG+   +K  L  I TP
Sbjct:  407 RLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVV--EVNMEESFGIALQKKVPLSAIVTP 514          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.854e-19
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3
Query:    3 KILFYAWAVTRDPQLW-ENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 320
            +++  AWA+ RDP +W  + E F PER +++ LDY G +  F PFGSGRRICPG+N  +  VE+ +A L+  F+W+   G    + D+T  FG+   RK  L   P+
Sbjct:  388 EVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPLIAFPS 494          
BLAST of FC872967 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.972e-18
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:   18 AWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIP 317
            A A+ RDP+ W++P  F PERF+++ ++Y G  ++F PFGSGRRICPG    +  + L LA L++ F W+LP G+   +LDM   F +       L +IP
Sbjct:  384 AHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
The following BLAST results are available for this feature:
BLAST of FC872967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71A8_MENPI1.614e-2044.76Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71AF_ARATH2.107e-2042.99Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH4.695e-2044.00Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH4.695e-2042.06Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH4.695e-2042.59Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN8.008e-2043.56Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A1_SORBI8.008e-2043.01Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C75A6_CAMME1.366e-1941.82Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71AC_ARATH8.854e-1941.12Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST1.972e-1842.00Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DH10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872967 ID=FC872967; Name=FC872967; organism=Citrus clementina; type=EST; length=553bp
CCAAAATACTTTTCTATGCTTGGGCAGTAACAAGAGATCCCCAACTTTGG
GAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCCTTGGA
TTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAGAAGGA
TTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCATTGGCT
AAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAACCACA
TGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAAGAATG
ACTTGTTTCTGATTCCTACTCCTTACAATAATATTTCGTGAGGGATGCAA
TGACTTTGTTGTAAGATAAATTGTGCGGCCACATGATACCAATTTATGAT
ATAATGGGTGTAATAAATACAAAAGAAAATGGATCAATCAAAATCCTGTT
TGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAATAAAAAAAAAA
AAA
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