FC872973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.578e-13 Identity = 59/229 (25.76%), Postives = 100/229 (43.67%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRK-AWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECL-SPNPFSASFTRASLNT-ARMVPLMYGYDDNQRLPR--LEEYVKSLLFDNLP 674 WD+ +E LP+ MKI F+ +NE+ + K G + +RK AW A+L +A+W A+GH+P +EYL NG ++ + + + I + RL DD + E +D D S I Y+ +H + T EDA H + + +N + L + S + S + AR + MY D + +++ V+ +L +P Sbjct: 365 WDVSLVEGLPDFMKIAFEFWLKTSNELIAEAVKAQGQDMAAYIRKNAWERYLEAYLQDAEWIATGHVPTFDEYLNNGTPNTGMCVLNLIPLLLMGEHLPIDILEQIFLPSRFHHLIELASRLVDDARDFQAE-KDHGDLSCIECYLKDHPESTVEDALNHVNGLLGNCLLEMNWKFLKKQDSVPLSCKKYSFHVLARSIQFMYNQGDGFSISNKVIKDQVQKVLIVPVP 592
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11 Identity = 54/221 (24.43%), Postives = 91/221 (41.18%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDN--QRLPRLEEYVKSLL 659 W + ++ LPE MK +K D E+ + KE + + ++ + EAKW GH+P EE+ I++ T E+V S PP+ + R +DL + K E + + S + YM E+ +V E AQ ++ D WK +N+E L+ A + + + + Y DN + + +KSLL Sbjct: 321 WSITCLDTLPEYMKPIYKLFMDTYTEMEEFLAKEGRTDLFNCGKEFVKEFVRNLMVEAKWANEGHIPTTEEHDPVVIITGGANLLTTTCYLGMSDIFTKESVEWAVSAPPLFRYSGILGRRLNDLMTHKAEQERKHSSSSLESYMKEY-NVNEEYAQTLIYKEVEDVWKDINREYLTTKNIPRPLLMAVIYLCQFLEVQYAGKDNFTRMGDEYKHLIKSLL 540 The following BLAST results are available for this feature:
BLAST of FC872973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872973 ID=FC872973; Name=FC872973; organism=Citrus clementina; type=EST; length=763bpback to top |