FC872994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.392e-48 Identity = 92/241 (38.17%), Postives = 140/241 (58.09%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQS-SEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L +++PY GL +W AI TWV+ Y +Y + + +++D E+QAW+ E VGH D R+A WW ++++ ++L+ +T +IW +SA HA++NFGQY Y GY PNRP L R+ IPDE E + D KY+ +P T A+V+ LS H+ DE Y+G+RQ S WT D ++I +RNR+ +NR G + Y+LM P ++ +T +G+PNS+SI Sbjct: 691 LVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAP-----SSEPGVTCRGVPNSVSI 926
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47 Identity = 94/241 (39.00%), Postives = 140/241 (58.09%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQS-SEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L +++PY GL +W AI TWV+ Y +Y + + +K+D E+Q+W+ E VGH D R+A WW E+++ D+L+ LT LIW +SA HA++NFGQY Y GY PNRP L R+ IPDE E A + +KYY +P + A+V+ LS H+ DE Y+G+RQ S WT D ++I +RN + +NR G + Y+L+ P ++ +T +G+PNS+SI Sbjct: 684 LIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVP-----SSEPGVTCRGVPNSVSI 919
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45 Identity = 94/241 (39.00%), Postives = 140/241 (58.09%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHE---LAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 +++P+ GL +W AI TWV+ Y + FY D DSV DEE+QA+W E+R GHGDK++A WW +++S ++L LT ++W ++A HA+VNFGQY + GY PNRP++ R +P E + + L + D+ + P + T+ A+++VLS H++DE YLG Q+ W D I RN++ +LKNR G + Y+LM P +D +TG GIPNS SI Sbjct: 706 EDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-----FSDAGVTGMGIPNSTSI 941
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45 Identity = 94/241 (39.00%), Postives = 140/241 (58.09%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHE---LAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 +++P+ GL +W AI TWV+ Y + FY D DSV DEE+QA+W E+R GHGDK++A WW +++S ++L LT ++W ++A HA+VNFGQY + GY PNRP++ R +P E + + L + D+ + P + T+ A+++VLS H++DE YLG Q+ W D I RN++ +LKNR G + Y+LM P +D +TG GIPNS SI Sbjct: 689 EDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-----FSDSGVTGMGIPNSTSI 924
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.341e-45 Identity = 91/239 (38.08%), Postives = 133/239 (55.65%), Query Frame = 3 Query: 12 NFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHE--LAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 ++P+ GL +W AI WV DY +Y D++ + SDEE+Q WW E+R +GHGDK++ WW + ++D+LI +T + W +S HA+VNFGQY Y GY PNRPT R +P E + L E +K LK P + TL +++LS H+ DE Y+G++Q + W ++ I ERN N LKNR G + Y+L+ P + + +TG G+P SISI Sbjct: 663 DYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEH-----GVTGMGVPYSISI 896
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.363e-45 Identity = 87/240 (36.25%), Postives = 133/240 (55.42%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L +++PY GL +W AI W + Y + +Y D++V++D E+Q+W+ E + GH DKR A WW +++ +L LT L+W SA HA++NFGQY GY PNRP L R+ +P EG E A L+ D +++L LP T +++ LS H++DE YLG+R WT D ++I RN + +NR G + Y+LM P + +T +G+PNS++I Sbjct: 665 LIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAEGDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSG-----PGITCRGVPNSVTI 899
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.720e-45 Identity = 90/240 (37.50%), Postives = 134/240 (55.83%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTH--ELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 +++PY GL +W +I W DY +YK D V DEE++AWW+E+R GH DK++ WW ++++NL+Q LTI++W +S HA+VNFGQY YAGY PNRPT+ R+ IP E E+ + + ++ L+ LP + A +++LS H+ DE Y+G+ W + I RN N KNR G + Y+L+ P ++ +TG+GIPNSISI Sbjct: 662 KDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKP-----FSEPGVTGRGIPNSISI 896
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.394e-43 Identity = 93/242 (38.43%), Postives = 133/242 (54.96%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSE--WTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 + ++PY GL +W AI V+ Y FY D S+ SD E+QAWW EI+ GH DK++ WW ++N+ +L Q LT +IW +S HA++NFGQY + GY PNRPTL RK IP E + + + +L LP + T A+ E LS H+ DE YL + + + W D+ + I ERN++ +LKNR G Y+L+ P + + +TG+GIPNSISI Sbjct: 681 VIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPH-----GVTGRGIPNSISI 917
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.457e-42 Identity = 89/245 (36.33%), Postives = 131/245 (53.47%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDE-GTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGK------GIPNSISI 722 +++PY GL VW AI W Y +Y + DEE+QAWW E+R GH DK++ WW E++S +NL Q L ++W +S HA+VNFGQY AGY PNRPT+ R+ +P E G ++ + + +K L P ++ + A++++LS H+SDE Y+G + WT D +++ E N + KNR G + Y L+ P + DG T + GIPNSISI Sbjct: 693 EDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDMRDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDGDPTDEKMVMEMGIPNSISI 936
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.006e-41 Identity = 85/239 (35.56%), Postives = 127/239 (53.14%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDE-GTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 +++PY GL VW AI W DY + +Y + DEE+Q WW E+R GH DK++ WW E++ ++L+Q L ++W +SA HA+VNFGQY AGY PN P++ R+ +P E G E+ +K +L LP + + A +++LS H SDE Y+G Q W D +++ E N++ +NR G + Y L+ P N + + GIPNSISI Sbjct: 694 EDYPYANDGLLVWDAIKQWASDYVAHYYPCAVDIVDDEELQDWWTEVRTKGHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEMLAFKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932 The following BLAST results are available for this feature:
BLAST of FC872994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872994 ID=FC872994; Name=FC872994; organism=Citrus clementina; type=EST; length=738bpback to top |