FC872997

Overview
NameFC872997
Unique NameFC872997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.329e-39
Identity = 98/253 (38.74%), Postives = 141/253 (55.73%), Query Frame = 3
Query:    9 AVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVR-VLLEEGNVLDCVDPSMGDYPED-----EVLPVLKLALVCTCHIPSSRPSMAEVVQIL 749
            AVKKLV + I        RE+  +GK RH NLI LE ++   +  L++  Y  NGSL   LHE  P  P L W+ R  + +GTA GLA+LH    P I+H ++KP NILLD +  P ISDFG+A+LL +    + SN  Q  +GY+APE    +++  E  D+Y +GV++LEL+T ++ ++   +    +   VR V  + G +   VDPS+ D   D     +V   L LAL C       RP+M +VV+ L
Sbjct:  842 AVKKLVFTGIKNGSVSMVREIETIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKP-LDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRES-DVYSYGVVLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVVKQL 1092          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.329e-39
Identity = 99/270 (36.67%), Postives = 154/270 (57.04%), Query Frame = 3
Query:    3 MLAVKKL---VTSDIIQYPED------FEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL--LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV--EYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 773
            ++AVKKL   V     +Y  D      F  EV  LG  RH +++ L     +   KLLV +Y PNGSL   LH        L W  R ++ L  A+GL++LHH   PPI+H ++K SNILLD +Y  +++DFG+A++  ++        +    + GY+APE    +LRVNEK DIY FGV++LELVTG++P   E G+ +   +++ V   L++  +   +DP +    ++E+  V+ + L+CT  +P +RPSM +VV +LQ +   +P
Sbjct:  707 VVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYV-YTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKD---MAKWVCTALDKCGLEPVIDPKLDLKFKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVP 972          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.572e-39
Identity = 97/256 (37.89%), Postives = 146/256 (57.03%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEY----GEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPE-DEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 758
            +A+K+L + D  Q   +F+ EV  L +A+HPNL+ L GY      KLL+  Y  NGSL   LHE++   P L W  R ++  G A+GLA+LH S  P I+H ++K SNILL D +   ++DFGLARL+   D HV ++     LGY+ PE   Q+     K D+Y FGV++LEL+TGRRP++     G  +++     ++    E  +    DP + D    +E+L VL++A  C    P +RP+  ++V  L+ I
Sbjct:  768 VAIKRL-SGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTD-LVGTLGYIPPEYG-QASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIF---DPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLENI 1017          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.572e-39
Identity = 105/282 (37.23%), Postives = 155/282 (54.96%), Query Frame = 3
Query:    6 LAVKKL--VTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLP--STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSAL----GYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVE--YGEDNVVILSEHVRVL------LEEG-----------NVLDCVDPSM--GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 764
            LAVKKL   T    +    F  EV  LG+ RH N++ L       + + LV ++  NGSL   LH      +  PL WT RF + +G A+GL++LHH   PPI+H ++K +NILLD    PR++DFGLA+ L R D   +S+   S +    GY+APE    S +VNEK D+Y FGV++LEL+TG+RP +  +GE+  ++       L       E+G           ++   VDP M       +E+  VL +AL+CT   P +RP+M +VV++L+  K+
Sbjct:  711 LAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTS-KVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLKEKKS 991          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.572e-39
Identity = 100/250 (40.00%), Postives = 149/250 (59.60%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 752
            +AVK+L  +   Q+ + F  EV ++ +  H NL+ L G   T    LLV +Y  N SL   L  R     PL+W  RFK+ILGTA+G+A+LH      IIH ++K SNILL+D++ PRI+DFGLARL    DK  +S      LGY+APE   +  ++ EK D+Y FGVL++E++TG+R   + +D   IL + V  L    NV + VDP +GD + + E   +L++ L+C       RP+M+ VV++++
Sbjct:  348 VAVKRLFFNTK-QWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVR-KDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPE-DKTHISTAIAGTLGYMAPEYVVRG-KLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSIL-QSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMK 592          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.633e-38
Identity = 98/263 (37.26%), Postives = 153/263 (58.17%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEY-GEDNVVILSEHVRVLLEEGNVLDCVDPSMG-DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ---VIKTPLPQR 779
            +AVK+L +S   Q   +F  E+ ++   +HPNL+ L G     +  LLV +Y  N SL   L         L W+ R KV +G AKGLA+LH   R  I+H ++K +N+LLD + N +ISDFGLA+L    + H+ S R    +GY+APE   +   + +K D+Y FGV+ LE+V+G+    Y  ++  + L +   VL E+G++L+ VDP +G  + + E + +L +AL+CT   P+ RP M+ VV +LQ    ++ PL +R
Sbjct:  692 IAVKQL-SSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHI-STRIAGTIGYMAPEYAMRGY-LTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPLVKR 951          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.633e-38
Identity = 96/259 (37.07%), Postives = 152/259 (58.69%), Query Frame = 3
Query:    3 MLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRP---VEYGEDNVVILSEHVRVLLEEGNVLDCVDPSM---GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 761
            ++A+KKL+     Q   +F  E+  +GK +H NL+ L GY    + +LLV +Y   GSL+  LH+R  +   L+W  R K+ +G A+GLA LHH+  P IIH ++K SN+LLD+N   R+SDFG+ARL++ +D H+  +      GYV PE   QS R + K D+Y +GV++LEL+TG++P    ++G++N+V   +    L  +G + D  D  +       E E+L  LK+A  C       RP+M +V+ + + I+
Sbjct:  912 VVAIKKLIHVSG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEY-YQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWVK----LHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQ 1164          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 2.132e-38
Identity = 96/250 (38.40%), Postives = 139/250 (55.60%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGE-DNVVILSEHVRVLLEEGNVLDCVDPSMGDYPED-EVLPVLKLALVCTCHIPSSRPSMAEVVQIL 749
            +A+KKL + D  Q   +FE EV  L +A+HPNL+ L G+ +    +LL+  Y  NGSL   LHER      L W  R ++  G AKGL +LH    P I+H ++K SNILLD+N+N  ++DFGLARL++  + HV S      LGY+ PE   Q+     K D+Y FGV++LEL+T +RPV+  +      L   V  +  E    +  DP +     D E+  VL++A +C    P  RP+  ++V  L
Sbjct:  759 VAIKKL-SGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHV-STDLVGTLGYIPPEYG-QASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWL 1005          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 2.132e-38
Identity = 91/254 (35.83%), Postives = 142/254 (55.91%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV-EYGEDNVVI-----LSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 749
            +A+K+LV     +    F  E++ LG+ RH +++ L GY       LL+ +Y PNGSL   LH        L W  R +V +  AKGL +LHH   P I+H ++K +NILLD ++   ++DFGLA+ L         +    + GY+APE    +L+V+EK D+Y FGV++LEL+ G++PV E+GE   ++       E +    +   V+  VDP +  YP   V+ V K+A++C     ++RP+M EVV +L
Sbjct:  717 VAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH--LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEY-AYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.637e-38
Identity = 98/251 (39.04%), Postives = 143/251 (56.97%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLP--STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 749
            +AVKK++ S   Q   +F  E+  LGK RH NL++L+G+       LL+ DY PNGSL + L+  +P  S   LSW  RF++  G A GL +LH  +   +IH ++KPSN+L+D   NPR+ DFGLARL  R      +      +GY+APEL+ ++   +   D++ FGVL+LE+V GR+P + G      L + V  L   G +L  +DP +G  Y   E    L + L+C    P+SRPSM  V++ L
Sbjct:  392 IAVKKIIPSSR-QGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYT-VPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYER-GTLSETTALVGTIGYMAPELS-RNGNPSSASDVFAFGVLLLEIVCGRKPTDSG---TFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYL 635          
The following BLAST results are available for this feature:
BLAST of FC872997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RPK1_IPONI7.329e-3938.74Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
RLK5_ARATH7.329e-3936.67Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
PSKR1_DAUCA9.572e-3937.89Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
HSL2_ARATH9.572e-3937.23LRR receptor-like serine/threonine-protein kinase ... [more]
CRK3_ARATH9.572e-3940.00Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y5344_ARATH1.633e-3837.26Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE1.633e-3837.07Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
PSKR1_ARATH2.132e-3838.40Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CLV1_ARATH2.132e-3835.83Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
LRKA1_ARATH3.637e-3839.04Lectin-domain containing receptor kinase A4.1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BD01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2BD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872997 ID=FC872997; Name=FC872997; organism=Citrus clementina; type=EST; length=821bp
GAATGTTAGCAGTCAAAAAACTTGTTACATCCGATATAATCCAATATCCA
GAAGACTTTGAAAGGGAAGTTCGAGTCTTGGGAAAAGCAAGGCACCCAAA
TTTGATATCACTGGAAGGATACTACTGGACTCCTCAGTTGAAGCTTTTGG
TGTCTGATTATGCACCAAACGGTAGCTTGCAAGCCAAACTCCATGAAAGG
CTTCCTTCTACTCCACCGCTTTCTTGGACTAACAGATTCAAAGTAATCCT
CGGAACAGCAAAAGGCCTTGCTCATTTGCACCATTCTTTCCGCCCACCCA
TTATTCATTACAACCTAAAACCAAGCAACATCTTGCTTGATGACAATTAC
AACCCAAGGATTTCAGACTTTGGATTGGCGAGGCTTTTGACCAGGCTCGA
CAAACACGTAATGAGCAACAGATTTCAGAGCGCACTAGGGTATGTGGCAC
CAGAATTAACATGCCAGAGCTTAAGAGTGAATGAGAAATGTGACATATAT
GGTTTTGGGGTTTTAATACTTGAGCTTGTAACTGGTAGAAGGCCTGTTGA
ATATGGTGAAGACAATGTAGTGATATTAAGCGAGCATGTGAGAGTTCTTC
TGGAAGAGGGCAACGTGTTAGATTGTGTTGATCCAAGCATGGGAGATTAC
CCAGAAGATGAGGTCTTACCGGTACTCAAATTGGCCCTTGTCTGCACTTG
TCATATACCATCAAGCAGGCCTTCAATGGCAGAGGTTGTCCAAATATTGC
AAGTCATCAAAACCCCACTTCCACAGAGAATGGAGGTATTCTAAAACACC
AATGGTGCTGCCCTGATCATT
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