FC872997

Overview
NameFC872997
Unique NameFC872997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: IRAK2_HUMAN (Interleukin-1 receptor-associated kinase-like 2 OS=Homo sapiens GN=IRAK2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 46/164 (28.05%), Postives = 88/164 (53.66%), Query Frame = 3
Query:   57 FEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL--LTRLDKHVM--SNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTG 536
            F+ E+++  +  HPN++ + G+    Q    +  Y  NGSLQ +L  +   + PL W  R  +  G    + +LH      IIH N+K SN+LLD N  P+++   +A L  + +  K+ M  ++  +++  Y+ PE   +  ++ ++ DI+  G+++ E++TG
Sbjct:  254 FQAELQICLRCCHPNVLPVLGFCAARQFHSFIYPYMANGSLQDRLQGQ-GGSDPLPWPQRVSICSGLLCAVEYLHGL---EIIHSNVKSSNVLLDQNLTPKLA-HPMAHLCPVNKRSKYTMMKTHLLRTSAAYL-PEDFIRVGQLTKRVDIFSCGIVLAEVLTG 411          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: HOG1_SETTU (Mitogen-activated protein kinase HOG1 OS=Setosphaeria turcica GN=HOG1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3
Query:   63 REVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV 569
            RE+++L   RH N+ISL   + +P    L   Y     L   LH  L S P      ++  +    +GL ++H +    ++H +LKPSNIL+++N + +I DFGLAR+        +S R+     Y APE+     + + + DI+  G +  E++ G +P+  G+D+V
Sbjct:   39 RELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTSRPLEKQFIQY-FLYQILRGLKYIHSA---GVVHRDLKPSNILVNENCDLKICDFGLARIQDPQVTGYVSTRY-----YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGKDHV 193          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: HOG1_NEOFI (Mitogen-activated protein kinase hog1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hog1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3
Query:   63 REVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV 569
            RE+++L   RH N+ISL   + +P    L   Y     L   LH  L S P      ++  +    +GL ++H +    ++H +LKPSNIL+++N + +I DFGLAR+        +S R+     Y APE+     + + + DI+  G +  E++ G +P+  G+D+V
Sbjct:   66 RELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTSRPLEKQFIQY-FLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRY-----YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGKDHV 220          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: HOG1_ASPFU (Mitogen-activated protein kinase hog1 OS=Aspergillus fumigatus GN=hog1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3
Query:   63 REVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV 569
            RE+++L   RH N+ISL   + +P    L   Y     L   LH  L S P      ++  +    +GL ++H +    ++H +LKPSNIL+++N + +I DFGLAR+        +S R+     Y APE+     + + + DI+  G +  E++ G +P+  G+D+V
Sbjct:   66 RELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTSRPLEKQFIQY-FLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRY-----YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGKDHV 220          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: HOG1_ASPCL (Mitogen-activated protein kinase hog1 OS=Aspergillus clavatus GN=hog1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3
Query:   63 REVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV 569
            RE+++L   RH N+ISL   + +P    L   Y     L   LH  L S P      ++  +    +GL ++H +    ++H +LKPSNIL+++N + +I DFGLAR+        +S R+     Y APE+     + + + DI+  G +  E++ G +P+  G+D+V
Sbjct:   66 RELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTSRPLEKQFIQY-FLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRY-----YRAPEIMLTWQKYDVEVDIWSTGCIFAEMLEG-KPLFPGKDHV 220          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 50/187 (26.74%), Postives = 91/187 (48.66%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALG------YVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRP 545
            +A+K L +    +   DF  E  ++G+  HPN+I LEG        ++++++  NGSL + L +       +      + I    K LA +++      +H +L   NIL++ N   ++SDFGL+R    L+       + SALG      + APE   Q  +     D++ +G+++ E+++ G RP
Sbjct:  668 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY------VHRDLAARNILVNSNLVCKVSDFGLSRF---LEDDTSDPTYTSALGGKIPIRWTAPE-AIQYRKFTSASDVWSYGIVMWEVMSYGERP 844          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 3
Query:   51 EDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRP 545
            E  +RE+ V+  ARHPN++ L     T      V +Y   G L  K+ +       ++W   +++I   A    H        + H ++KP N+LLDDN N ++SDFGL+ L     +  + +       YVAPE+  +      K DI+  GV++  L+ G  P
Sbjct:   55 EQIKREISVMRIARHPNVVELYEVMATKTRIYFVMEYCKGGELFNKVAKG-KLRDDVAWKYFYQLI--NAVDFCHSRE-----VYHRDIKPENLLLDDNENLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYDGTKADIWSCGVVLFVLLAGYLP 211          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 57/207 (27.54%), Postives = 96/207 (46.38%), Query Frame = 3
Query:   48 PEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKV---ILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR---LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDY 650
            P    RE+ +L + RHPN++SL+          L+ ++     L   L + L S PP  + +   V   +    +G+   H      ++H +LKP N+L+DD    +++DFGLAR   +  R+  H +       L Y +PE+   S R +   DI+  G +  EL T ++P+ +G+  +  L    R L    N +     S+ DY
Sbjct:   45 PSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEF-----LSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSR---RVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEV-----VTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELAT-KKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDY 237          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: Y0133_DICDI (Probable serine/threonine-protein kinase DDB_G0278665 OS=Dictyostelium discoideum GN=DDB_G0278665 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.790e-11
Identity = 66/246 (26.83%), Postives = 116/246 (47.15%), Query Frame = 3
Query:   54 DFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHE-RLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL-----DDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 770
            +FE+E+ +  +   HPN++   G+  +P  K LV +Y   GSL   LH      +P L    R K+    AKG+  LH   R  I+H +LKP N L+     +   + +++DFGLA   T   +       + +  Y++PE+  Q  + +   D++ +G  ++E++T +RP  Y E + +   E  RV  EEG     + P +    E ++  +++    C     + RP+   + Q L  +   L
Sbjct:  229 EFEKELEMHKELLHHPNIVHFVGFCVSP--KCLVLEYIEGGSLDKYLHNPNYTFSPQL----RLKMANDIAKGMCFLH---RNEILHLDLKPQNFLVVSISPEAPVSIKLADFGLA---TSSSRSFYGPTVEGSFLYMSPEVFTQK-KFSRAADVWSYGACLIEILTNKRP--YQEYDQLGYLELARV-REEG-----LPPMIPPEIEGDLRKIIE---ACFHRDHTKRPNFENIEQFLDAMTDSL 450          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: WNK4_ORYSJ (Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica GN=WNK4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.790e-11
Identity = 55/191 (28.80%), Postives = 101/191 (52.88%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFER---EVRVLGKARHPNLISLEGYYWTPQLKLL--VSDYAPNGSLQA--KLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNP-RISDFGLARLLTRLDKHVMSNRFQSALG---YVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRP 545
            +A  ++   +++Q P++ ER   EV +L   +H N++    Y+   Q K +  +++   +GSL+   + H R+      +W  +        +GL +LH + +PPIIH +LK  NI ++ N+   +I D GLA ++       ++ R +S +G   ++APEL  ++   +E  DIY FG+ +LE+ T   P
Sbjct:   51 VAWSQVEIDEVMQSPDNLERLYSEVHLLKSLKHENVMKFYNYWVDDQKKTINVITELFTSGSLRQYRQKHPRVDLKAIKNWARQ------VLRGLDYLH-THQPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVM-------LTPRAKSVIGTPEFMAPELYDEN--YDELVDIYSFGMCMLEMFTLEYP 225          
The following BLAST results are available for this feature:
BLAST of FC872997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IRAK2_HUMAN2.902e-1128.05Interleukin-1 receptor-associated kinase-like 2 OS... [more]
HOG1_SETTU2.902e-1130.77Mitogen-activated protein kinase HOG1 OS=Setosphae... [more]
HOG1_NEOFI2.902e-1130.77Mitogen-activated protein kinase hog1 OS=Neosartor... [more]
HOG1_ASPFU2.902e-1130.77Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
HOG1_ASPCL2.902e-1130.77Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
EPHB2_CHICK2.902e-1126.74Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
CIPKA_ARATH2.902e-1129.70CBL-interacting serine/threonine-protein kinase 10... [more]
CDC2_PONAB2.902e-1127.54Cell division control protein 2 homolog OS=Pongo a... [more]
Y0133_DICDI3.790e-1126.83Probable serine/threonine-protein kinase DDB_G0278... [more]
WNK4_ORYSJ3.790e-1128.80Probable serine/threonine-protein kinase WNK4 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BD01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2BD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872997 ID=FC872997; Name=FC872997; organism=Citrus clementina; type=EST; length=821bp
GAATGTTAGCAGTCAAAAAACTTGTTACATCCGATATAATCCAATATCCA
GAAGACTTTGAAAGGGAAGTTCGAGTCTTGGGAAAAGCAAGGCACCCAAA
TTTGATATCACTGGAAGGATACTACTGGACTCCTCAGTTGAAGCTTTTGG
TGTCTGATTATGCACCAAACGGTAGCTTGCAAGCCAAACTCCATGAAAGG
CTTCCTTCTACTCCACCGCTTTCTTGGACTAACAGATTCAAAGTAATCCT
CGGAACAGCAAAAGGCCTTGCTCATTTGCACCATTCTTTCCGCCCACCCA
TTATTCATTACAACCTAAAACCAAGCAACATCTTGCTTGATGACAATTAC
AACCCAAGGATTTCAGACTTTGGATTGGCGAGGCTTTTGACCAGGCTCGA
CAAACACGTAATGAGCAACAGATTTCAGAGCGCACTAGGGTATGTGGCAC
CAGAATTAACATGCCAGAGCTTAAGAGTGAATGAGAAATGTGACATATAT
GGTTTTGGGGTTTTAATACTTGAGCTTGTAACTGGTAGAAGGCCTGTTGA
ATATGGTGAAGACAATGTAGTGATATTAAGCGAGCATGTGAGAGTTCTTC
TGGAAGAGGGCAACGTGTTAGATTGTGTTGATCCAAGCATGGGAGATTAC
CCAGAAGATGAGGTCTTACCGGTACTCAAATTGGCCCTTGTCTGCACTTG
TCATATACCATCAAGCAGGCCTTCAATGGCAGAGGTTGTCCAAATATTGC
AAGTCATCAAAACCCCACTTCCACAGAGAATGGAGGTATTCTAAAACACC
AATGGTGCTGCCCTGATCATT
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