FC872998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_DEHSC (ATP synthase subunit beta OS=Dehalococcoides sp. (strain CBDB1) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 59/127 (46.46%), Postives = 84/127 (66.14%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFD-EGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTG 643 G+V QVIG+VVDV F + +P + ALE+ + ++VLEV H+G V+ ++ T+GL RG V++T P++VPVGR TLGRI N GE +D +GD+K+E +PIHR AP E + Q+L TG Sbjct: 4 GKVIQVIGSVVDVEFSADSMPALFNALEIPRENGKMVLEVQSHVGNNRVKCLSFTPTDGLERGAEVIDTTRPLSVPVGRGTLGRIFNVLGEALDNRGDVKSEKTMPIHRLAPGMDELESSAQVLETG 130
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_DEHSB (ATP synthase subunit beta OS=Dehalococcoides sp. (strain BAV1) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 59/127 (46.46%), Postives = 84/127 (66.14%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFD-EGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTG 643 G+V QVIG+VVDV F + +P + ALE+ + ++VLEV H+G V+ ++ T+GL RG V++T P++VPVGR TLGRI N GE +D +GD+K+E +PIHR AP E + Q+L TG Sbjct: 4 GKVIQVIGSVVDVEFSADSMPALFNALEIPRENGKMVLEVQSHVGNNRVKCLSFTPTDGLERGAEVIDTTRPLSVPVGRGTLGRIFNVLGEALDNRGDVKSEKTMPIHRLAPGMDELESSAQVLETG 130
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BURA4 (ATP synthase subunit beta OS=Burkholderia ambifaria (strain MC40-6) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFD-EGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTG 643 G++ Q IGAV+DV F E +P I AL ++ L LEV Q +G+GVVRTI + ++GL RG V NT PI+VPVG+ TLGRIM+ G PIDE G +++EH IH++APAF E + ++L TG Sbjct: 9 GKIVQCIGAVIDVEFPRESMPKIYDALILDGSE--LTLEVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELSPSTELLETG 133
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACHK (ATP synthase subunit beta OS=Bacillus thuringiensis subsp. konkukian GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G+V Q++G VVDV+FD G LP I AL V+ S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ N G+ ID G++ + PIHR+APAF E +T+ +IL TG Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETG 136
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACHD (ATP synthase subunit beta OS=Bacillus halodurans GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 68/135 (50.37%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G + QV+G VVDVRF G LP + AL VE V + LEVA H+G+ VRTIAM T+GLVRG V++TG+ I+VPVG VTLGR+ N GE ID + + PIHREAP F E +T+ +IL TG Sbjct: 4 GHITQVMGPVVDVRFQSGQLPELNNALRVEQKGADQNAVDVNVTLEVALHLGDDTVRTIAMGSTDGLVRGTEVVDTGAAISVPVGEVTLGRVFNVLGESIDLDEPIPADAERSPIHREAPKFEELSTKTEILETG 138
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACCZ (ATP synthase subunit beta OS=Bacillus cereus (strain ZK / E33L) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G+V Q++G VVDV+FD G LP I AL V+ S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ N G+ ID G++ + PIHR+APAF E +T+ +IL TG Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETG 136
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACC3 (ATP synthase subunit beta OS=Bacillus cereus (strain 03BB102) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G+V Q++G VVDV+FD G LP I AL V+ S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ N G+ ID G++ + PIHR+APAF E +T+ +IL TG Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETG 136
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACC0 (ATP synthase subunit beta OS=Bacillus cereus (strain AH820) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G+V Q++G VVDV+FD G LP I AL V+ S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ N G+ ID G++ + PIHR+APAF E +T+ +IL TG Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETG 136
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACAN (ATP synthase subunit beta OS=Bacillus anthracis GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G+V Q++G VVDV+FD G LP I AL V+ S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ N G+ ID G++ + PIHR+APAF E +T+ +IL TG Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETG 136
BLAST of FC872998 vs. ExPASy Swiss-Prot
Match: ATPB_BACAH (ATP synthase subunit beta OS=Bacillus thuringiensis (strain Al Hakam) GN=atpD PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 266 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDTGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTG 643 G+V Q++G VVDV+FD G LP I AL V+ S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ N G+ ID G++ + PIHR+APAF E +T+ +IL TG Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETG 136 The following BLAST results are available for this feature:
BLAST of FC872998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872998 ID=FC872998; Name=FC872998; organism=Citrus clementina; type=EST; length=645bpback to top |