FC873025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_RHOPB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 55/125 (44.00%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGN--FADRR-AQFQQL 675 R KT VMVG+VA+G PI VQ+MT DT DVAGTVE+V + G++LVRITV + A A I++ L ++ PL+ D H+ L AE DK R+NPGN F ++R +QF + Sbjct: 18 RHKTTQVMVGDVAVGGGAPIVVQSMTNTDTADVAGTVEQVAALTRAGSELVRITVDREEAAAAVPHIRDALRKRGITTPLIGDFHYIGHKLLADYPACAEALDKYRINPGNVGFKNKRDSQFADI 142
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_PSEU2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLV-----KVPLVADIHFDHRIALRVAELGVDCLRINPGN 111
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_PSESM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. tomato GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDAAEAFGRIKQLV-----KVPLVADIHFDYRIALRVAELGVDCLRINPGN 111
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_PSEF5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIK-----QQVKVPLVADIHFDYKIALRVAELGVDCLRINPGN 111
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_GEOTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 301 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 654 E IH R KTR V VG++ IG + + +Q+MTT T DV TV ++ R+ + G +VR+ +R ADA EIK K NIPLVADIHF +AL+ E DKIR+NPGN R Sbjct: 3 EIIH---RSKTRPVRVGSLTIGGNNEVIIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRVACPDERAADAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR 113
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_SULNB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Sulfurovum sp. (strain NBC37-1) GN=ispG PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18 Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 654 R T+ + VG+VA+G + PI VQ+MT +DT+DVA TVE++ R+ GAD+VR+ V +A A IK + ++PL+ADIHF +AL A+ D IR NPGN ++ Sbjct: 4 RYPTKKIYVGDVAVGGDAPISVQSMTYSDTRDVAATVEQINRLHFAGADMVRVAVPEMEDALALKAIKEQI-----SLPLIADIHFNYRLALEAAKWVDCIRFNPGNIGEK 109
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_PSE14 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ispG PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLV-----KVPLVADIHFDYRIALRVAELGVDCLRINPGN 111
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_EXISA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ispG PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18 Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 301 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 654 E +H+++ TR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ +R ADA EIK+ + NIPLV DIHF +AL+ E DKIR+NPGN R Sbjct: 3 EILHRSL---TRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDERAADALAEIKSRI-----NIPLVVDIHFDYKLALKAIESGVDKIRINPGNIGRR 113
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_LYSSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGN 642 R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN Sbjct: 7 RSNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVEATVAEILRLEEAGCQIVRVAVPDERAADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGN 109
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_CORU7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 651 RRKTR +MVG+V +GSEHPI VQ+MTT T D+ T++++ ++ G D+VR+ R+A+A ++ K IP++ADIHF P + E +RVNPGN + Sbjct: 19 RRKTRQLMVGDVGVGSEHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPKPRDAEAL-----PIIAKKSPIPVIADIHFQPRYIFQAIEAGCAAVRVNPGNIKE 124 The following BLAST results are available for this feature:
BLAST of FC873025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873025 ID=FC873025; Name=FC873025; organism=Citrus clementina; type=EST; length=755bpback to top |