FC873038

Overview
NameFC873038
Unique NameFC873038
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.532e-19
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E DE P+++  DIVF+++ K+H KFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  215 TFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.532e-19
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E DE P+++  DIVF+++ K+H KFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  215 TFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  226 TFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  226 TFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  226 TFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E DE P+++  DIVFV++ KEH KFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  215 TFPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E DE P ++  DIVFV++ K+H KFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  215 TFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.458e-17
Identity = 44/144 (30.56%), Postives = 80/144 (55.56%), Query Frame = 3
Query:   12 GEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 443
            G+  E P    GD++  +++K ++ FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  264 GQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.458e-17
Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E D AP+    DIVF+++ K H  FKR+G DL     +SL +ALCG    +  L G ++ +     E++KP   + IN  G+P+ + P  RG L + F + FP++L+P     L  +LP
Sbjct:  212 TFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPN-HEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLP 333          
BLAST of FC873038 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.904e-17
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 3
Query:    3 TFPGEADEAPDTVTGDIVFVLQQKEHLKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 371
            TFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  219 TFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339          
The following BLAST results are available for this feature:
BLAST of FC873038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
DNJB4_PONAB4.532e-1939.84DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN4.532e-1939.84DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB5_MOUSE1.010e-1840.65DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN1.010e-1840.65DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN1.010e-1840.65DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB4_MOUSE2.249e-1839.84DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN2.249e-1839.84DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJA1_DICDI1.458e-1730.56DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNAJ1_DROME1.458e-1737.40DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJB1_MOUSE1.904e-1739.84DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BH05FM1 AbsDev Citrus clementina cDNA clone KN0AAI2BH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873038 ID=FC873038; Name=FC873038; organism=Citrus clementina; type=EST; length=783bp
TTACGTTCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGAC
ATTGTATTTGTTCTACAACAGAAAGAGCACCTGAAATTTAAGCGAAAGGG
TGATGACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTG
GCTTTCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCAAA
TCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAATGA
TGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTACA
TTCATTTCACTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCAAG
ATGCTGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGATAT
GGAACTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGAGG
AGGAAATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAGAT
GACGATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATG
ATGTAGAAGAAAAGGGGTGGCCTGATTTAGTATTTTCATTGTTTGGGAGA
AAAAGATTCTCAACATATTTATTTTCTGTTATAGGCTTTAGAGGTTCTAG
TTTTGGTTTGTCTGTCTTTATTCTTATGTTTTTCTGATAACTGACTATGT
AATGGAATTCTAGCGTTGCACCTTCAGACTCAATGCTCATAATTAATATT
TTTAGTGTTTAAAAAAAAAAAAAAAAAAAAAAA
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