FC873161

Overview
NameFC873161
Unique NameFC873161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length822
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.697e-19
Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDND-RWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLNAYRILFDKDGNPRLSSLGL 778
            F+ ++L  AT +F PD  + E G      VYKG+LD+  + VAVK+  +     +R+FL E   +  L    L NLIG C + D+RLLV EFMP  +L  HL     + + + W MR+++A   A+ LE+   K     +Y D  +  IL D+  +P+LS  GL
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGR---VYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGL 234          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.217e-19
Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSLGL 778
            F+  +L++AT DF P N + E G      VYKG L++ R VAVK  S  +     QF+ E  A+ ++    L  L GCC+E + R+LV E++PN +L + LF  +T  + W+ R  + L +A+ L Y   +   R ++ D+ A  IL D    P++S  GL
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGP---VYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGL 839          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 57/161 (35.40%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLNAYRILFDKDGNPRLSSLGL 778
            F  +++  AT  FS    +   G  +   VY+GKL ND WVA+KR    +     Q + E K + ++    L  L+GCC E  + +LV E+MPN TL++HL       + W +RL VA   A+A+ Y  SS    +YH D+ +  IL D D N +++  GL
Sbjct:  336 FPYKEIEKATDGFSEKQKL---GIGAYGTVYRGKLQNDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGL 493          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = 2
Query:  245 SDLDSGGKNDRQTVPSFTE--------------FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSK--FNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ---PMKWAMRLRVALYLAQALEYCSSKGRA--LYHDLNAYRILFDKDGNPRLSSLGLYENSRDG 799
            S +  GG +D  T+P  +E               S+Q LR+ T +FS DNI+   G     +VYKG+L +   +AVKR            +F  E   +  +R   L  L+G C + +E+LLV E+MP  TL++HLF W  +   P+ W  RL +AL +A+ +EY         ++ DL    IL   D   +++  GL   + +G
Sbjct:  543 SSVSVGGISDTYTLPGTSEVGDNIQMVEAGNMLISIQVLRSVTNNFSSDNILGSGGF---GVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 745          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 69/206 (33.50%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  227 SSVLESSDLDSGGKNDRQTVPS--FTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRW----------VAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET--QPMKWAMRLRVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSLGLYENSRDG 799
            SS   SS + +  K + + + S     F+  +L+ AT +F PD+++ E G      V+KG LD              +AVK+ ++  +   R++L E   +G L    L  LIG C E + RLLV EFM   +L  HLF      +P+ W +R+ VAL  A+ L +  S   + +Y D+ A  IL D D N +LS  GL   +RDG
Sbjct:   28 SSRKSSSTVAAAQKTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGF---GCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGL---ARDG 227          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.424e-19
Identity = 60/163 (36.81%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLNAYRILFDKDGNPRLSSLGL 778
            FSL+Q++ AT +F   N + E G      VYKGKL +   +AVK+ S  +   +R+FL E   +  L    L  L GCC E  + LLV EF+ N +LA+ LF   ETQ  + W  R ++ + +A+ L Y   + R   ++ D+ A  +L DK  NP++S  GL
Sbjct:  612 FSLRQIKIATNNFDSANRIGEGGFGP---VYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGL 771          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.424e-19
Identity = 61/199 (30.65%), Postives = 100/199 (50.25%), Query Frame = 2
Query:  197 SICWFHCHLKSSVL--ESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLNAYRILFDKDGNPRLSSLGL 778
            ++CW     +++ L  E+ DLD  G    +T+    +F    +  AT  FS  N +   G      VYKG+L     VA+KR S+ +   + +F  E   V  L+   LA L+G C + +E++LV EF+PN++L   LF  E  + + W  R ++   +A+ + Y     R   ++ DL A  IL D D +P++S  G+
Sbjct:  302 AMCWLLARRRNNKLSAETEDLDEDGITSTETL----QFQFSAIEAATNKFSESNKLGHGGFGE---VYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGM 493          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.424e-19
Identity = 66/198 (33.33%), Postives = 96/198 (48.48%), Query Frame = 2
Query:  194 FSICWFHCHLKSSVLESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLNAYRILFDKDGNPRLSSLGL 778
            F ICW    L+ +  ES D D    N  Q       +  + +  AT  FS  N +   GE     VYKGK  N   VAVKR SK +  D+++F  EA  V  ++   LA L+G C + D + L+ EF+ N++L   LF  E Q  + W  R ++   +AQ + +     +   +Y D  A  IL D D NP++S  G+
Sbjct:  313 FFICWRRKSLQRTEFES-DSDVSTTNSLQ-------YEFKTIEAATNKFSKSNKL---GEGRFGEVYKGKFSNGTEVAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGM 499          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLNAYRILFDKDGNPRLSSLGL 778
            D  T     +FS + +  AT  FS  N++   G      VY+GKL +   VAVKR SK +   + +F  EA  V  L+ + L  L+G C E +E++LV EF+PN++L   LF    Q  + W  R  +   +A+ + Y     R   ++ DL A  IL D D NP+++  G+
Sbjct:  323 DEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGE---VYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGM 491          
BLAST of FC873161 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLNAYRILFDKDGNPRLSSLGL 778
            F+L+Q++ AT +F P+N + E G      VYKG L +   +AVK+ S  +   +R+F+ E   +  L+   L  L GCC E  E LLV E++ N +LA+ LF  E Q   + W+ R +V + +A+ L Y   + R   ++ D+ A  +L D   N ++S  GL
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGFGP---VYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGL 814          
The following BLAST results are available for this feature:
BLAST of FC873161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
PBS1_ARATH1.697e-1936.59Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y1561_ARATH2.217e-1935.40Probable LRR receptor-like serine/threonine-protei... [more]
WAKLO_ARATH2.895e-1935.40Wall-associated receptor kinase-like 14 OS=Arabido... [more]
TMK1_ARATH2.895e-1931.07Probable receptor protein kinase TMK1 OS=Arabidops... [more]
BIK1_ARATH3.781e-1933.50Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y1534_ARATH8.424e-1936.81Probable LRR receptor-like serine/threonine-protei... [more]
CRK25_ARATH8.424e-1930.65Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK22_ARATH8.424e-1933.33Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK35_ARATH1.437e-1833.72Putative cysteine-rich receptor-like protein kinas... [more]
Y5344_ARATH2.451e-1834.36Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873161 ID=FC873161; Name=FC873161; organism=Citrus clementina; type=EST; length=822bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTCAATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCCTTGGCCTTTATGAAAATAGTAGAGACGGGT
AAAGTTACCGCACTAACTTGGC
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