FC873194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23 Identity = 60/125 (48.00%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 11 ATTSKNNDEVDGKPGPGA-LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFS-CFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA 379 A T K DE + G L++KVSMDGAPYLRKVDL+ Y EL AL+ +F+ CF+ + D ++ + YEDKDGD MLVGDVPWEMFI SCK+L+IMKGS+A Sbjct: 111 AATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS-----------------ATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 60/119 (50.42%), Postives = 74/119 (62.18%), Query Frame = 2 Query: 59 GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA--IGLAPRAMEK 409 G ++KVSMDG PYLRK+DL + Y +L+ AL+K+F IG LKD EYV YEDKDGDWML GDVPW MF++SCKRL+IMK SDA GL PR +++ Sbjct: 95 GLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVA---------------LKDG-DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22 Identity = 58/136 (42.65%), Postives = 82/136 (60.29%), Query Frame = 2 Query: 2 NSLATTSKNNDEVDGKPGPGAL-------FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL 388 N+ ++ ND++ G P ++KV++DGA YLRKVDL Y YG+L +ALE MF + +++ ++ +L E+V TYEDKDGD MLVGDVPW MF++SCKR+++MK DAIGL Sbjct: 59 NNYISSMVTNDQLVGWPPVATARKTVRRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF---------------QGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 23 KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIG 385 KNN+E G ++KVSMDG PY+RK+DL + +Y L + LE +F C IG + E K EY++ YEDKD DWMLVGDVPW+MF +SCKRL+I+K SDA G Sbjct: 84 KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-----------VAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22 Identity = 65/131 (49.62%), Postives = 82/131 (62.60%), Query Frame = 2 Query: 35 EVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMF---SCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 415 +V+GK G FIKV+MDG RKVDL +++Y L+ LE MF + T+G P R LL GS E+VLTYEDK+GDWMLVGDVPW MFI+S KRL++MK S+A GLA R E ++ Sbjct: 122 KVNGKVQVG--FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR----------LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNE 240
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.489e-21 Identity = 51/102 (50.00%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 68 FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS 373 ++KVS+DGA +LRK+DL Y Y +L+SAL+ +F C+ D L SE V YEDKDGDWML GDVPWEMF+ SCKRL+IMK S Sbjct: 76 YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI------------------NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 59/123 (47.97%), Postives = 76/123 (61.79%), Query Frame = 2 Query: 26 NNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLA 391 N + D ++F+KV+MDG P RK+DL + Y LS+ LE+MF +G + E G E+ +K L GS VLTYEDK+GDWMLVGDVPW MFI S +RL+IMK S+A G A Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGS-RTLETDGH---METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20 Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 5 SLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL 388 S+ +KN+D K ++ +KV+MDG RKVDL +Y L L+ MF S+ G + + E+ LL GS EY++TY+DKDGDWMLVGDVPW+MF+ S RL+IMK S G+ Sbjct: 132 SVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSN-TQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.049e-19 Identity = 50/123 (40.65%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 14 TTSKNNDEVDGKPGPG--ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 376 ++S N + K G +F+K++MDG P RKVDL Y Y +LS+A++K+F G + A + +++ G EY L YED +GD MLVGDVPW+MFI + KRL+++K SD Sbjct: 100 SSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFR----GLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 2 Query: 23 KNNDEVDGKPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKL-KDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS----DAIGLAP 394 + NDE D K P +K++MDG P RKVDL+ Y +Y +LSSA+E++F F Q A E +E K+ LL G+ Y L YED DGD ML GD+PW++F+ + KRL++M+ S D IG P Sbjct: 193 RQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325 The following BLAST results are available for this feature:
BLAST of FC873194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873194 ID=FC873194; Name=FC873194; organism=Citrus clementina; type=EST; length=725bpback to top |