FC873194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.515e-18 Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 65 LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 376 +F+K++MDG P RKVDL Y +Y +LS ++K+F Q + G E + LL G E+ LTYED +GD MLVGDVPW+MF+ S KRL+++K S+ Sbjct: 152 MFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEE----KPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18 Identity = 53/131 (40.46%), Postives = 74/131 (56.49%), Query Frame = 2 Query: 53 GPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCF-------TIGQCGSHEAPGREMLSESK-LKDLLHGS--EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 415 G A F+KV+MDG P RKVDL + YGELS+A++++F T+ + A G E + + LL G EY L YED +GD MLVGDVPW MFI + +RL++++ SD RA + + Sbjct: 94 GKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNASTIRAGSRKR 224
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18 Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 2 Query: 5 SLATTSKNNDEV-DGKPGPGAL------FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSES-KLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 376 +LAT+SK + E+ +GK A FIK++MDG P RK+DL + +Y +LS A++K+F Q A ++ E + LL G+ EY L YED +GD +LVGDVPW MF+ S KRL+++K SD Sbjct: 151 NLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 59 GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 376 G +F+K++M G P RKVDL + +Y +LS ++K+F Q + P + E + LL G+ EY LTYED +GD MLVGDVPW+MF+ S KRL+++K S+ Sbjct: 148 GGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQ---RDFPS-SIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17 Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 71 IKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKL-KDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 376 +K++MDG P RK+DL Y +Y LSSA++++F F Q A + ++ K+ LL GS EY L YED +GD MLVGDVPW++F+ + KRL++++ S+ Sbjct: 220 VKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 65 LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPR 397 L++K++M+G P RKV+L Y NY +LS A++++FS + DL +Y L YED +GD +LVGDVPWEMF+ + KRL ++K S A L+PR Sbjct: 81 LYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS-------------------KKDSWDL--NRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA30_ARATH (Auxin-responsive protein IAA30 OS=Arabidopsis thaliana GN=IAA30 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 59 GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMK 367 G+ ++KV+M+G P RK+DL + Y +L + L+ MF+ + A +M SE +VLTY DK+GDWM+VGDVPWEMF+ S +RLKI + Sbjct: 81 GSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILW------AEEEDMCSEKS---------HVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 62 ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMK 367 +LF+KV M+G P RK+DL ++ Y L L MF I CG+ + +VLTYEDKDGDWM+VGD+PW+MF+++ +RLKI + Sbjct: 72 SLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSII--CGNRDR-----------------KHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA20_ARATH (Auxin-responsive protein IAA20 OS=Arabidopsis thaliana GN=IAA20 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15 Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 59 GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS 373 G+ ++KV+M+G P RK+DL + Y +L L+ MF+ + ++ +D+ + +VLTY DK+GDWM+VGDVPWEMF+ + +RLKI + + Sbjct: 83 GSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILW---------------AEEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA8_ORYSJ (Auxin-responsive protein IAA8 OS=Oryza sativa subsp. japonica GN=IAA8 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15 Identity = 50/129 (38.76%), Postives = 69/129 (53.49%), Query Frame = 2 Query: 2 NSLATTSKNNDEVDGKPGPG---ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMF-SCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 376 +SL T + D G G G +LF+KV M+G P RK+DL Y L + L MF + T C R+ + +H +VLTYED++GDWM+ GDVPWE+F+ S KRL+I + D Sbjct: 80 SSLTTATVTADRGGGGGGHGRRRSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCH------RQFAVVGMKTNKVH---HVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199 The following BLAST results are available for this feature:
BLAST of FC873194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873194 ID=FC873194; Name=FC873194; organism=Citrus clementina; type=EST; length=725bpback to top |