FC873225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_PYRHO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus horikoshii GN=flpA PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.535e-44 Identity = 97/188 (51.60%), Postives = 126/188 (67.02%), Query Frame = 3 Query: 231 VVVEPHRHEGVF--IAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 V V+ H+ GV+ I + + TKNLV G+ VY E+ I + E EYRIWNP RSKL AA++ G+ N IKPG VLYLG ASGTT SHVSDIVG G ++ +EFS R R+LV + ++R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID Sbjct: 2 VEVKKHKFPGVYTVIDDDGSERIATKNLVPGQRVYGERVIKWEGE-----EYRIWNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSID 184
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_PYRIL (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=flpA PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43 Identity = 99/197 (50.25%), Postives = 133/197 (67.51%), Query Frame = 3 Query: 234 VVEPHRHE---GVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPA 803 VV+ +HE GV++ K ++ + L TKNL G+ VY E+ I ++E EYR WNP+RSKLAAA++ G+ I I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NV+PI+ DAR P +Y V VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID PA Sbjct: 5 VVDVRKHEHHFGVYVVKFEDGTERLATKNLTPGKRVYGERLIKWRDE-----EYREWNPYRSKLAAAIVNGIKFIPIQEGTHMLYLGAASGTTPSHISDIVGERGLIYSVEFSPRVFREFIEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPA 196
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_PYRCJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=flpA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43 Identity = 98/196 (50.00%), Postives = 130/196 (66.33%), Query Frame = 3 Query: 231 VVVEPHR-HEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPA 803 V V PH H GV++ + ++ + L T+NL G VY E+ I + VEYR WNP+RSKLAAA+L G+ + I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NVIPI+ DAR P +Y + VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID PA Sbjct: 6 VEVRPHELHYGVYVVRFEDGTERLATRNLTPGRRVYGERLIKWEG-----VEYREWNPYRSKLAAAILNGLKLVPIREGTHMLYLGAASGTTPSHISDIVGERGLIYSVEFSPRVFREFMEKLVDQGRRNVIPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPA 196
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAR (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=flpA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.391e-42 Identity = 96/196 (48.98%), Postives = 131/196 (66.84%), Query Frame = 3 Query: 231 VVVEPH-RHEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPA 803 V V PH RH GV++ + ++ + + TKNL G+ VY E+ I + EYR WNP+RSKLAAA++ G+ + I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NV+PI+ DAR P +Y + VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID PA Sbjct: 6 VDVRPHERHYGVYVVRFEDGTERIATKNLTPGKRVYGERLIKWGGD-----EYREWNPYRSKLAAAIVNGLKLVPIREGTHMLYLGAASGTTPSHISDIVGEKGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPA 196
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_AERPE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Aeropyrum pernix GN=flpA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.391e-42 Identity = 92/187 (49.20%), Postives = 126/187 (67.38%), Query Frame = 3 Query: 234 VVEPHRHEGVFIAKGKEDAL--VTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 V E R GV++ + ++ +L TKNLV G+ VY E+ E EYR WN +RSKLAAA+L G+ + +K G R+LYLG ASGTT SH+SDI+GP G +Y VEF+ R RDL+ + + R N+ PI+ DAR P KYR LV VD +++DVAQP+QA I+ NA +FL+ GG+ +++IKA ID Sbjct: 7 VREHDRWRGVYVVELEDGSLRIATKNLVPGQRVYGERIFRYNGE-----EYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSID 188
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_THENV (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=flpA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.008e-41 Identity = 97/196 (49.49%), Postives = 127/196 (64.80%), Query Frame = 3 Query: 231 VVVEPH-RHEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPA 803 V V PH RH GV+ K ++ + L T+NL G+ VY E+ + EYR WNP+RSKLAAA+ G+ + I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NV+PI+ DAR P +Y V VDV + DVAQP QA+ILA NA YFLK GG+ ++ IKA ID PA Sbjct: 6 VEVRPHERHFGVYALKFEDGSERLATRNLTPGKRVYGERLVKWGG-----AEYREWNPYRSKLAAAIANGIKFVPIQEGTHILYLGAASGTTPSHMSDIVGERGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVAYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPA 196
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_STAMF (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=flpA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.439e-39 Identity = 91/189 (48.15%), Postives = 126/189 (66.67%), Query Frame = 3 Query: 231 VVVEPH-RHEGVFIAKGKEDA--LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 V ++PH ++ GV+I + ++ + L TKNLV G VY E+ E EYR WN +RSKLA A+ G+ I+ G +LYLG A+GTT SH+SDIVGP G +++VEF+ R R+ V +A R N+ PI+ DAR P +YR LV MVD I++D+AQP+QA I+A NA YFLK G+ +++IKA ID Sbjct: 5 VNIKPHEKYYGVYIVELEDGSVKLATKNLVPGHRVYGERLYRWGGE-----EYREWNLYRSKLAGALANGLAEQPIREGHSILYLGVATGTTASHISDIVGPTGRIFSVEFAPRVMREFVLVADIRKNLYPILGDARKPKEYRHLVEMVDGIYADIAQPEQAAIVADNADYFLKDNGYLLLAIKARSID 188
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_SULIY (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=flpA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.880e-39 Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 3 Query: 291 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 L T+NLV+G VY E+ I + VEYR WN FRSKLA A+L G+ I+ G +VLYLGAASGTT+SHVSDI+ NG Y VEFS R R+L+ +A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID Sbjct: 27 LCTRNLVSGFNVYGERLIKYEG-----VEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSID 187
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_SULIN (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=flpA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.880e-39 Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 3 Query: 291 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 L T+NLV+G VY E+ I + VEYR WN FRSKLA A+L G+ I+ G +VLYLGAASGTT+SHVSDI+ NG Y VEFS R R+L+ +A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID Sbjct: 27 LCTRNLVSGFNVYGERLIKYEG-----VEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSID 187
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_SULIM (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=flpA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.880e-39 Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 3 Query: 291 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 L T+NLV+G VY E+ I + VEYR WN FRSKLA A+L G+ I+ G +VLYLGAASGTT+SHVSDI+ NG Y VEFS R R+L+ +A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID Sbjct: 27 LCTRNLVSGFNVYGERLIKYEG-----VEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSID 187 The following BLAST results are available for this feature:
BLAST of FC873225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873225 ID=FC873225; Name=FC873225; organism=Citrus clementina; type=EST; length=811bpback to top |