FC873225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_METTH (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=flpA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.485e-33 Identity = 81/178 (45.51%), Postives = 110/178 (61.80%), Query Frame = 3 Query: 255 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 +GVFI ++L+T N G VY E+ I D EYR+W+P RSKLAAA+L G+ + RVLYLGA++GTT SH+SDIV +G VY +EFS R R+L+ + + R N+ P++EDA P Y +V D+++ DVAQPDQ R+ N FLK G+ +I IKA ID Sbjct: 11 DGVFIMN---NSLLTINPNPGVKVYGERII-----DWGGREYRVWDPRRSKLAAAILNGLRGFSLNSDSRVLYLGASAGTTASHISDIV-TDGRVYCIEFSPRMMRELLGVCESRKNMAPLLEDASRPLSYLRMVEAADLVYCDVAQPDQTRLFIENMDCFLKRDGYGLIMIKARSID 179
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_ARCFU (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Archaeoglobus fulgidus GN=flpA PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.721e-30 Identity = 80/175 (45.71%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 282 EDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPAE 806 +D LVTK+ Y EK DG YR W P+RSKLAA +L G + ++ RVLYLGAASGTTVSH++DIV G++YAVE+S + L+ + ++R N+IP++ DA P KY +V VD+I+ D+AQ +Q IL NA +FLK G VI +KA IDS E Sbjct: 12 DDTLVTKSKYGSH--YGEKVF-----DG----YREWVPWRSKLAAMILKG-HRLKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPE 173
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_METMJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=flpA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.701e-29 Identity = 68/138 (49.28%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 378 YRIWNPFRSKLAAA-VLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID 788 YR+W+P+RSKLAA LGG + + P +RVLYLGAA+GTTVSHV+D V VYAVEF+ R +DL+ +A++R N++PI+ DA P +Y + VD+++ DVAQP+Q I N FLK GGH V+ +K +D Sbjct: 25 YRVWDPYRSKLAALYTLGG--GVELTPEMRVLYLGAANGTTVSHVADYVE---TVYAVEFAPRPMQDLLEVARRRRNIVPIMADASRPEEYAPFMEAVDLVYQDVAQPNQVEIAERNL-VFLKPGGHLVLMLKTRSVD 156
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_METTP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=flpA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.143e-28 Identity = 74/158 (46.84%), Postives = 103/158 (65.19%), Query Frame = 3 Query: 318 EAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDS 791 E +Y EK + DG R+W+P RSKLAA +L + P +VLYLGAA+GTTVS++ DI+ G++YAVE S R+ RDL+ +A++R N+IP++ DA P YR +V VD+++ DVAQ +QA I + NAS +LK G V+ IKA IDS Sbjct: 24 EPLYGEKIV-----DGL----RVWDPRRSKLAALLLRYPCLEGVVPSGKVLYLGAANGTTVSYLGDIL-TGGMIYAVEISPRAMRDLLLLAEQRENIIPVLGDAARPETYRRIVEPVDLLYQDVAQRNQAEIASRNASIYLKPNGLMVVMIKARSIDS 171
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_THEVO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoplasma volcanium GN=flpA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.057e-26 Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 321 AVYNEKRIS--VQNEDGTKVE---YRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKA 776 +VY E V E+ TK+ YR W+P RSK AAA+L G+ I+ VLYLGA++GTT+SH+SDI P G +Y VE S+ L+++AKKR N+ PI+EDA P KY + VDV++ D++Q +Q +I N + F G V+ I++ Sbjct: 24 SVYTETETPQRVYGEEITKINNRTYREWDPRRSKPAAAILNGLRRFPIRENDSVLYLGASTGTTISHISDIC-PAGTIYGVEVSYEPFSKLLDLAKKRNNLYPILEDANSPEKYSFFIEHVDVMYQDISQRNQIQIFKNNVNTFNPKRGFLVLKIRS 179
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_THEAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoplasma acidophilum GN=flpA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.545e-25 Identity = 69/165 (41.82%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 300 KNLVA-GEAVYNE--KRISVQNEDGTKVE---YRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKA 776 KN++ G +Y K V ED + E YR W P RSKLAAA+L G+ N+ I +LYLGA++GTTVSHVSDI P+G +YAVE ++ L+++A++R N+ PI+EDA P +YR V VDVI+ D++Q +Q I N F V+ ++ Sbjct: 19 KNMLRIGNKLYTRTSKNKKVYGEDIIRFEHANYREWRPDRSKLAAAILKGLHNMPIGESSSILYLGASTGTTVSHVSDIA-PSGRIYAVEVAYEPFSKLLDLAEQRDNIYPILEDANLPERYRFFVDHVDVIYQDISQRNQIAIFKRNMDEFQPRSAFLVLKTRS 182
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_HALMA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Haloarcula marismortui GN=flpA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.667e-25 Identity = 74/178 (41.57%), Postives = 101/178 (56.74%), Query Frame = 3 Query: 276 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPAEA 809 G E +L T+ G+ VY E+ T ++R W+P RSKL A + G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R R+L++ A+ R N+ P+++DAR P Y +V VDV+ DVA QAR+ LN FL G + +IKA D +A Sbjct: 13 GGETSLATQ----GQPVYGER---------TDGDWRRWDPHRSKLGAMLAHGMDT-GLGGGETVLYLGAAAGTTVSHVADFGGPT---YAVEFAPRPVRELLDAAESRRNLFPLLKDARKPESYAHVVEPVDVVVQDVATRGQARVATLN-KQFLTDDGRLLAAIKARSEDVTADPDA 172
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_METHJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=flpA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23 Identity = 65/134 (48.51%), Postives = 86/134 (64.18%), Query Frame = 3 Query: 381 RIWNPFRSKLAAAVLGGVDNIWIKPGVR---VLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIK 773 RIW+P SK+AA +I +P VR +LYLGAA+G+TVS +SD VVYAVEFS R R L+ +A+ R N+IP+ EDAR+P +Y V VD++ D+AQ DQA I AL FLK GGH ++ +K Sbjct: 25 RIWDPGHSKVAALC-----HIHGEPPVRNARILYLGAAAGSTVSFLSDYAE---VVYAVEFSPRPVRSLIRLARARKNIIPLFEDARYPERYLPFVEPVDLLIQDIAQRDQAEI-ALRNLIFLKQGGHLILFLK 149
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_PICTO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Picrophilus torridus GN=flpA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.652e-22 Identity = 63/151 (41.72%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 324 VYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKA 776 VY EK I +N R W+P RSKLAAA+L G + + +LYLGA++GTTVSH+SDI +G +YAVE S+ S L ++++ R N+ PI+EDA +Y+ V D I+ D+AQ +Q +I NA F +I IKA Sbjct: 25 VYGEKIIRKKNS-----YLREWDPRRSKLAAAILKGFKHANFDKKLNILYLGASTGTTVSHLSDIC-ISGRLYAVELSYDSFVKLYSLSQARNNIFPILEDANLVERYKFFVEKCDFIYQDIAQRNQVQIFNQNADIFKPRSAILIIKIKA 169
BLAST of FC873225 vs. ExPASy Swiss-Prot
Match: FLPA_HALLT (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=flpA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21 Identity = 75/178 (42.13%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 276 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSPVPAE 806 G E L T+ G VY E DG +R W+P RSKL G + + G VLYLGAASGTTVSHV+D GP YAVEF+ R RDLV A+ R + P+++DAR P +Y +V VD I DVA QA + NA FL G +++IKA D V E Sbjct: 16 GGETRLATR----GPPVYGEP-----TADG----WRAWDPGRSKLGGMFELGFET-GLSGGETVLYLGAASGTTVSHVADFAGPT---YAVEFAPRPARDLVEAAEPRDRLFPLLKDARTPKRYAHVVESDVDAIVQDVATRGQAEVAVRNAR-FLADDGRLLLAIKARSEDVTVEPE 175 The following BLAST results are available for this feature:
BLAST of FC873225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873225 ID=FC873225; Name=FC873225; organism=Citrus clementina; type=EST; length=811bpback to top |