FC873241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT2_SCHCO (Actin-2 OS=Schizophyllum commune GN=ACT2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.771e-22 Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 177 E++ +AP++MK+K+VAPPERKYSVWIGGSILASLSTFQ MW SK EYDESGP IVHRKC Sbjct: 316 ELSNMAPANMKVKIVAPPERKYSVWIGGSILASLSTFQNMWCSKQEYDESGPGIVHRKC 374
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT_TRYCR (Actin OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.313e-22 Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 EI+ LAPSS+K KVVAPPERKYSVWIGGSIL+SL+TFQ MWI K EYDE+GPSIVH KCF Sbjct: 317 EISNLAPSSIKPKVVAPPERKYSVWIGGSILSSLTTFQTMWIKKSEYDEAGPSIVHNKCF 376
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT5_ARATH (Putative actin-5 OS=Arabidopsis thaliana GN=ACT5 PE=5 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 EI ALAP SMKIKVVAPPERKYSVW+GGSILASLS+F MWI+K EYDE G +IVHRKCF Sbjct: 319 EINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT2_NAEFO (Actin-2 (Fragment) OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 E+T +AP+SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EY+++GP IVHR+ F Sbjct: 312 ELTNMAPASMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKEEYEDAGPGIVHRESF 371
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT1_TRYBB (Actin A OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 EI+ L PSS+K KVVAPPERKYSVWIGGSIL+SL+TFQ MWI+K EYDESGPSIVH KCF Sbjct: 317 EISNLPPSSIKPKVVAPPERKYSVWIGGSILSSLTTFQSMWITKSEYDESGPSIVHSKCF 376
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT_COPC7 (Actin OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ACT1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.153e-22 Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 E+ AL+P+SM++K+VAP ERKYSVWIGGSILASLSTFQ +W SK EYDESGP IVHRKCF Sbjct: 316 ELLALSPASMRVKIVAPLERKYSVWIGGSILASLSTFQNLWCSKQEYDESGPGIVHRKCF 375
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT1_NAEGR (Actin-1 OS=Naegleria gruberi GN=ACT1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.958e-21 Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 E+TA+AP+SMKI+VVAPPERKYSVWIGGSIL+SLSTFQ MWI+ EY+++G IVHRKCF Sbjct: 315 ELTAMAPASMKIRVVAPPERKYSVWIGGSILSSLSTFQSMWITAEEYEDAGCGIVHRKCF 374
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT4_LYTPI (Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.269e-20 Identity = 46/52 (88.46%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 156 EIT+LAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP Sbjct: 103 EITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 154
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACT9_ARATH (Putative actin-9 OS=Arabidopsis thaliana GN=ACT9 PE=5 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.833e-19 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 177 E+ AL PSSMK+KVV PPE + SVWIGGSILASLSTF QMWI+K EY+E G +IVHRKC Sbjct: 307 ELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
BLAST of FC873241 vs. ExPASy Swiss-Prot
Match: ACTD_PHYPO (Actin, spherule isoform OS=Physarum polycephalum GN=ARDD PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 6.965e-19 Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 1 EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 180 E+TA P+ MKIK++APP R+YS WIGGSILASLSTF+QM ISK EY+E GPSIVHRKCF Sbjct: 309 ELTAFEPT-MKIKIIAPPGRQYSAWIGGSILASLSTFEQMCISKKEYNECGPSIVHRKCF 367 The following BLAST results are available for this feature:
BLAST of FC873241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873241 ID=FC873241; Name=FC873241; organism=Citrus clementina; type=EST; length=556bpback to top |