FC873277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 54/185 (29.19%), Postives = 78/185 (42.16%), Query Frame = 3 Query: 18 VLVAIILDCFAYLALSDYQGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVA-------------------------SVTLSSMNFSGTLSPRIG------------------------VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 +L + CF+ D QG AL + ++ L + + W+ +PC W V C+ V+ S+TLSS+N +G + IG L+ L TL+L N + G IP E+GNLS L L L +N+L G+IP S+G LK LQ L Sbjct: 14 LLCFFFIPCFSL----DQQGQALLSWKSQLNISGDAFSSWHVADTSPCNWVGVKCNRRGEVSEIQLKGMDLQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSGEIPRSIGELKNLQVL 194 HSP 2 Score: 68.1662 bits (165), Expect = 5.753e-11 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 195 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 N+ + L S + SG + P IG L L L GN + G IP E+GNL +L +D+ NRLVG IPP++ + L+FL Sbjct: 431 NLTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFL 507
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 48/139 (34.53%), Postives = 63/139 (45.32%), Query Frame = 3 Query: 75 GDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICD-NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG------------------------ITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKL 416 G+AL + R + + + W +PC W V CD + V +++L+ G L P +G L L L L N ITG IP E+GNLS L +LDL NN L G IP SLG LK+L Sbjct: 33 GEALLSFRNGVLASDGVIGLWRPEDPDPCNWKGVTCDAKTKRVIALSLTYHKLRGPLPPELGKLDQLRLLMLHNNALYQSIPASLGNCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIPASLGQLKRL 171
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.483e-14 Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 6 SVKLVLVAIILDCFAYLALSDYQGDALFALRTSLRVPNNQLRDWNQNQ-VNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ 419 S+ + + I +Y S + DAL A + +L P L W+ + PC W V C N + V + L + SG +S RI LR L L+L+ N G IP L + L S+ L+ N L GK+PP++ NL L+ Sbjct: 6 SLFFIFLVIYAPLVSYADESQAEIDALTAFKLNLHDPLGALTSWDPSTPAAPCDWRGVGCTN-HRVTEIRLPRLQLSGRISDRISGLRMLRKLSLRSNSFNGTIPTSLAYCTRLLSVFLQYNSLSGKLPPAMRNLTSLE 143 HSP 2 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 165 WSNVICDNSNNVAS---VTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 +S V+ + +++ S V LSS +FSG + G LR L +L+L N I+G IP E+GN S+L L+L +NRL+G IP L L +L+ L Sbjct: 536 FSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLKVL 625
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13 Identity = 48/142 (33.80%), Postives = 66/142 (46.48%), Query Frame = 3 Query: 75 GDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNS-NNVASVTLSSMNFSG------------------------TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 G L ++ SL P++ L WN N +PC WS V C ++V SV LSS N +G TL I ++L TL L N +TGE+P+ L ++ +L LDL N G IP S G + L+ L Sbjct: 20 GFILQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVL 161
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 41/140 (29.29%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 9 VKLVLVAIILDCF-AYLALSDYQGDALFALRTSLRV---PNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKL 416 +++ L+++I F + L+ S D L ++ V P + L+ WN +PC+W + C+N + V +++L + G++ +G L TL +L L N G +P N L LDL +N + G+IP ++G+L L Sbjct: 1 MRMELISVIFFFFCSVLSSSALNSDGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGISCNNDSKVLTLSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNL 140
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 30 IILDCFAYLALS-DYQGDALFALRTSLRV-PNNQLRDWNQNQVNP-CTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 +I+ A L+LS QG AL R + P+ L +WN + +N C WS V C + V + LS + GTL+P + L L +L L N +G IP+E G+ +L LDL N L G+IPP L N L+ L Sbjct: 14 LIIGLQAPLSLSLTSQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSGVTCVDGK-VQILDLSGYSLEGTLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSLKHL 147
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13 Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 42 CFAYLALSDYQGDALFALRTSLRVPNNQLRDWNQNQVNPCT-WSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNL 407 C + D + +L + +S P W N +PCT W + C N N + ++L M +GT+SP G +++L + L N +TG IP+EL L +L +LD+ +N+L GK+P N+ Sbjct: 314 CLSSPGECDPRVKSLLLIASSFDYPPRLAESWKGN--DPCTNWIGIACSNGN-ITVISLEKMELTGTISPEFGAIKSLQRIILGINNLTGMIPQELTTLPNLKTLDVSSNKLFGKVPGFRSNV 433
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 54/157 (34.39%), Postives = 76/157 (48.41%), Query Frame = 3 Query: 42 CFAYLALSDYQGDALFALRTSLRVPNNQ-LRDW--NQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSL---------------------DLE-----NNRLVGKIPPSLGNLKKLQFL 425 CFAY + + L L++S+ P L DW + + C++S V CD+ V S+ +S GT+SP IG+L L LTL N TGE+P E+ +L+SL L DLE NN GK+PP + LKKL++L Sbjct: 22 CFAYTDM-----EVLLNLKSSMIGPKGHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTISPEIGMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVLDTYNNNFNGKLPPEMSELKKLKYL 173
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.146e-13 Identity = 52/146 (35.62%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 18 VLVAIILDCFAYLALSDYQGDALFALRTSLRVPNN---------QLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNL-SSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 VL+A+ CF+ L Q L+T L + N+ LRDWN + C W+ V C + + LS + +G++SP IG L + L N + G IP L NL SSL SL L +N L G IP LG+L L+ L Sbjct: 6 VLLALFFLCFSS-GLGSGQPGQRDDLQTLLELKNSFITNPKEEDVLRDWNSGSPSYCNWTGVTC-GGREIIGLNLSGLGLTGSISPSIGRFNNLIHIDLSSNRLVGPIPTTLSNLSSSLESLHLFSNLLSGDIPSQLGSLVNLKSL 149
BLAST of FC873277 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.369e-12 Identity = 51/148 (34.46%), Postives = 65/148 (43.92%), Query Frame = 3 Query: 54 LALSDYQGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVT------------------------LSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425 L+LS G AL +L+ R + W+ PC+W + C N V SV+ LSS N SG + P G L L L L N ++G IP ELG LS+L L L N+L G IP + NL LQ L Sbjct: 25 LSLSS-DGQALLSLK---RPSPSLFSSWDPQDQTPCSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVL 168 The following BLAST results are available for this feature:
BLAST of FC873277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873277 ID=FC873277; Name=FC873277; organism=Citrus clementina; type=EST; length=766bpback to top |